Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smad5P97454 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Smad5P97454 Gm14117-201ENSMUST00000122417 843 ntBASIC20.24■□□□□ 0.83
Smad5P97454 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smad5P97454 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smad5P97454 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smad5P97454 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smad5P97454 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smad5P97454 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad5P97454 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad5P97454 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad5P97454 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad5P97454 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad5P97454 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smad5P97454 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smad5P97454 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Smad5P97454 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smad5P97454 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Smad5P97454 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smad5P97454 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad5P97454 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.21■□□□□ 0.83
Smad5P97454 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smad5P97454 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad5P97454 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smad5P97454 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.21■□□□□ 0.83
Smad5P97454 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smad5P97454 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad5P97454 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Smad5P97454 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Smad5P97454 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad5P97454 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smad5P97454 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Smad5P97454 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad5P97454 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad5P97454 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad5P97454 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smad5P97454 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.2■□□□□ 0.82
Smad5P97454 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad5P97454 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smad5P97454 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smad5P97454 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Smad5P97454 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Smad5P97454 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smad5P97454 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Smad5P97454 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smad5P97454 Gm9959-201ENSMUST00000068277 390 ntBASIC20.19■□□□□ 0.82
Smad5P97454 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smad5P97454 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.18■□□□□ 0.82
Smad5P97454 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Smad5P97454 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smad5P97454 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.18■□□□□ 0.82
Smad5P97454 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smad5P97454 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Smad5P97454 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smad5P97454 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.18■□□□□ 0.82
Smad5P97454 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smad5P97454 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smad5P97454 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Smad5P97454 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smad5P97454 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smad5P97454 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Smad5P97454 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smad5P97454 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Smad5P97454 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smad5P97454 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Smad5P97454 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smad5P97454 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smad5P97454 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.16■□□□□ 0.82
Smad5P97454 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smad5P97454 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smad5P97454 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.16■□□□□ 0.82
Smad5P97454 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smad5P97454 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smad5P97454 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smad5P97454 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Smad5P97454 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.15■□□□□ 0.82
Smad5P97454 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smad5P97454 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smad5P97454 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smad5P97454 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smad5P97454 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smad5P97454 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smad5P97454 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smad5P97454 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smad5P97454 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smad5P97454 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smad5P97454 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.13■□□□□ 0.81
Smad5P97454 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smad5P97454 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smad5P97454 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smad5P97454 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Smad5P97454 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smad5P97454 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.13■□□□□ 0.81
Smad5P97454 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smad5P97454 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
Smad5P97454 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Smad5P97454 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smad5P97454 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smad5P97454 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smad5P97454 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms