Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.18■□□□□ 0.98
Lhx1P63006 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Lhx1P63006 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx1P63006 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx1P63006 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx1P63006 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx1P63006 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx1P63006 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lhx1P63006 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Lhx1P63006 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lhx1P63006 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lhx1P63006 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx1P63006 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx1P63006 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx1P63006 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.15■□□□□ 0.98
Lhx1P63006 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx1P63006 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Lhx1P63006 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lhx1P63006 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Lhx1P63006 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lhx1P63006 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lhx1P63006 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lhx1P63006 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lhx1P63006 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lhx1P63006 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.13■□□□□ 0.97
Lhx1P63006 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lhx1P63006 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lhx1P63006 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lhx1P63006 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lhx1P63006 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lhx1P63006 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lhx1P63006 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lhx1P63006 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lhx1P63006 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lhx1P63006 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lhx1P63006 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lhx1P63006 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.11■□□□□ 0.97
Lhx1P63006 Rps24-207ENSMUST00000224568 714 ntBASIC21.11■□□□□ 0.97
Lhx1P63006 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lhx1P63006 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.1■□□□□ 0.97
Lhx1P63006 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lhx1P63006 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.1■□□□□ 0.97
Lhx1P63006 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lhx1P63006 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lhx1P63006 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lhx1P63006 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lhx1P63006 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx1P63006 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx1P63006 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.09■□□□□ 0.97
Lhx1P63006 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx1P63006 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx1P63006 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lhx1P63006 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lhx1P63006 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lhx1P63006 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.08■□□□□ 0.97
Lhx1P63006 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lhx1P63006 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lhx1P63006 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lhx1P63006 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Lhx1P63006 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx1P63006 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx1P63006 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx1P63006 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.07■□□□□ 0.96
Lhx1P63006 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx1P63006 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx1P63006 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.06■□□□□ 0.96
Lhx1P63006 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx1P63006 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.06■□□□□ 0.96
Lhx1P63006 Gm45102-201ENSMUST00000207427 857 ntBASIC21.06■□□□□ 0.96
Lhx1P63006 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.06■□□□□ 0.96
Lhx1P63006 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Lhx1P63006 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.06■□□□□ 0.96
Lhx1P63006 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx1P63006 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.06■□□□□ 0.96
Lhx1P63006 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx1P63006 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx1P63006 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx1P63006 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx1P63006 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx1P63006 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.05■□□□□ 0.96
Lhx1P63006 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx1P63006 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx1P63006 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx1P63006 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.05■□□□□ 0.96
Lhx1P63006 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx1P63006 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx1P63006 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.04■□□□□ 0.96
Lhx1P63006 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx1P63006 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx1P63006 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.04■□□□□ 0.96
Lhx1P63006 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx1P63006 Gm9959-201ENSMUST00000068277 390 ntBASIC21.04■□□□□ 0.96
Lhx1P63006 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx1P63006 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx1P63006 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx1P63006 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx1P63006 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx1P63006 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx1P63006 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Lhx1P63006 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms