Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CtskP55097 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.96■□□□□ 0.95
CtskP55097 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CtskP55097 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CtskP55097 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CtskP55097 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CtskP55097 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.95■□□□□ 0.94
CtskP55097 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CtskP55097 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CtskP55097 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CtskP55097 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CtskP55097 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CtskP55097 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CtskP55097 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.94■□□□□ 0.94
CtskP55097 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CtskP55097 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CtskP55097 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CtskP55097 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CtskP55097 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CtskP55097 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CtskP55097 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.93■□□□□ 0.94
CtskP55097 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CtskP55097 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CtskP55097 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CtskP55097 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CtskP55097 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CtskP55097 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CtskP55097 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.92■□□□□ 0.94
CtskP55097 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CtskP55097 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CtskP55097 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CtskP55097 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CtskP55097 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CtskP55097 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CtskP55097 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CtskP55097 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CtskP55097 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CtskP55097 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CtskP55097 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.9■□□□□ 0.94
CtskP55097 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.9■□□□□ 0.94
CtskP55097 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CtskP55097 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CtskP55097 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CtskP55097 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CtskP55097 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.89■□□□□ 0.94
CtskP55097 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CtskP55097 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CtskP55097 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CtskP55097 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.89■□□□□ 0.93
CtskP55097 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.89■□□□□ 0.93
CtskP55097 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CtskP55097 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.89■□□□□ 0.93
CtskP55097 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.89■□□□□ 0.93
CtskP55097 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.89■□□□□ 0.93
CtskP55097 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CtskP55097 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CtskP55097 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CtskP55097 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
CtskP55097 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CtskP55097 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CtskP55097 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.88■□□□□ 0.93
CtskP55097 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CtskP55097 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.88■□□□□ 0.93
CtskP55097 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CtskP55097 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CtskP55097 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CtskP55097 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CtskP55097 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CtskP55097 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CtskP55097 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CtskP55097 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.87■□□□□ 0.93
CtskP55097 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.87■□□□□ 0.93
CtskP55097 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.87■□□□□ 0.93
CtskP55097 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CtskP55097 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CtskP55097 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.86■□□□□ 0.93
CtskP55097 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CtskP55097 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.86■□□□□ 0.93
CtskP55097 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.86■□□□□ 0.93
CtskP55097 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CtskP55097 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.86■□□□□ 0.93
CtskP55097 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CtskP55097 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CtskP55097 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CtskP55097 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CtskP55097 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CtskP55097 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CtskP55097 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CtskP55097 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CtskP55097 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CtskP55097 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CtskP55097 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CtskP55097 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CtskP55097 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CtskP55097 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CtskP55097 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CtskP55097 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CtskP55097 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.84■□□□□ 0.93
CtskP55097 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CtskP55097 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms