Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.27■■□□□ 1
Pdx1P52946 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.27■□□□□ 0.99
Pdx1P52946 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Pdx1P52946 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdx1P52946 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.26■□□□□ 0.99
Pdx1P52946 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdx1P52946 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdx1P52946 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pdx1P52946 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.26■□□□□ 0.99
Pdx1P52946 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.26■□□□□ 0.99
Pdx1P52946 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pdx1P52946 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.26■□□□□ 0.99
Pdx1P52946 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.26■□□□□ 0.99
Pdx1P52946 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pdx1P52946 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.26■□□□□ 0.99
Pdx1P52946 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.26■□□□□ 0.99
Pdx1P52946 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pdx1P52946 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pdx1P52946 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdx1P52946 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdx1P52946 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdx1P52946 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.25■□□□□ 0.99
Pdx1P52946 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pdx1P52946 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.25■□□□□ 0.99
Pdx1P52946 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.25■□□□□ 0.99
Pdx1P52946 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdx1P52946 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdx1P52946 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdx1P52946 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdx1P52946 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdx1P52946 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.24■□□□□ 0.99
Pdx1P52946 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pdx1P52946 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.24■□□□□ 0.99
Pdx1P52946 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pdx1P52946 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdx1P52946 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Pdx1P52946 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdx1P52946 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdx1P52946 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pdx1P52946 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pdx1P52946 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdx1P52946 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.23■□□□□ 0.99
Pdx1P52946 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.23■□□□□ 0.99
Pdx1P52946 Gm5921-201ENSMUST00000075898 882 ntBASIC21.23■□□□□ 0.99
Pdx1P52946 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdx1P52946 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.23■□□□□ 0.99
Pdx1P52946 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pdx1P52946 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pdx1P52946 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.22■□□□□ 0.99
Pdx1P52946 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Pdx1P52946 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdx1P52946 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdx1P52946 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pdx1P52946 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pdx1P52946 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.21■□□□□ 0.99
Pdx1P52946 Gm13238-201ENSMUST00000117655 780 ntBASIC21.21■□□□□ 0.99
Pdx1P52946 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdx1P52946 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdx1P52946 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdx1P52946 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.2■□□□□ 0.98
Pdx1P52946 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdx1P52946 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.19■□□□□ 0.98
Pdx1P52946 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.19■□□□□ 0.98
Pdx1P52946 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pdx1P52946 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pdx1P52946 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdx1P52946 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdx1P52946 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdx1P52946 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdx1P52946 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdx1P52946 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdx1P52946 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.18■□□□□ 0.98
Pdx1P52946 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdx1P52946 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pdx1P52946 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdx1P52946 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdx1P52946 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdx1P52946 Gm45444-201ENSMUST00000211394 898 ntBASIC21.17■□□□□ 0.98
Pdx1P52946 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdx1P52946 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdx1P52946 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdx1P52946 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pdx1P52946 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.16■□□□□ 0.98
Pdx1P52946 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdx1P52946 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pdx1P52946 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdx1P52946 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdx1P52946 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pdx1P52946 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdx1P52946 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdx1P52946 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pdx1P52946 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdx1P52946 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Pdx1P52946 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Pdx1P52946 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdx1P52946 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.14■□□□□ 0.97
Pdx1P52946 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdx1P52946 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdx1P52946 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdx1P52946 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms