Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmga2P52927 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmga2P52927 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Hmga2P52927 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hmga2P52927 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmga2P52927 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmga2P52927 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmga2P52927 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Hmga2P52927 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hmga2P52927 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hmga2P52927 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Hmga2P52927 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hmga2P52927 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.27■□□□□ 0.52
Hmga2P52927 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hmga2P52927 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmga2P52927 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmga2P52927 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.26■□□□□ 0.51
Hmga2P52927 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmga2P52927 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hmga2P52927 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmga2P52927 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmga2P52927 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmga2P52927 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmga2P52927 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmga2P52927 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.24■□□□□ 0.51
Hmga2P52927 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmga2P52927 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmga2P52927 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Hmga2P52927 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Hmga2P52927 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmga2P52927 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmga2P52927 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmga2P52927 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmga2P52927 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hmga2P52927 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmga2P52927 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmga2P52927 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmga2P52927 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmga2P52927 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Hmga2P52927 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmga2P52927 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.22■□□□□ 0.51
Hmga2P52927 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmga2P52927 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hmga2P52927 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.21■□□□□ 0.51
Hmga2P52927 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Hmga2P52927 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Hmga2P52927 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmga2P52927 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmga2P52927 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmga2P52927 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Hmga2P52927 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmga2P52927 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmga2P52927 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.2■□□□□ 0.5
Hmga2P52927 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hmga2P52927 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.2■□□□□ 0.5
Hmga2P52927 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.2■□□□□ 0.5
Hmga2P52927 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hmga2P52927 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmga2P52927 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.19■□□□□ 0.5
Hmga2P52927 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Hmga2P52927 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmga2P52927 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.19■□□□□ 0.5
Hmga2P52927 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmga2P52927 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Hmga2P52927 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmga2P52927 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmga2P52927 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.18■□□□□ 0.5
Hmga2P52927 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.18■□□□□ 0.5
Hmga2P52927 Gm8503-201ENSMUST00000118131 455 ntBASIC18.18■□□□□ 0.5
Hmga2P52927 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmga2P52927 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hmga2P52927 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmga2P52927 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Hmga2P52927 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmga2P52927 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmga2P52927 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.17■□□□□ 0.5
Hmga2P52927 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Hmga2P52927 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmga2P52927 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Hmga2P52927 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmga2P52927 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmga2P52927 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.16■□□□□ 0.5
Hmga2P52927 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmga2P52927 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmga2P52927 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmga2P52927 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Hmga2P52927 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmga2P52927 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hmga2P52927 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmga2P52927 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.16■□□□□ 0.5
Hmga2P52927 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmga2P52927 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmga2P52927 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmga2P52927 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.16■□□□□ 0.5
Hmga2P52927 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmga2P52927 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Hmga2P52927 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hmga2P52927 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmga2P52927 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmga2P52927 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms