Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-1P50220 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.7■□□□□ 0.42
Nkx2-1P50220 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Nkx2-1P50220 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-1P50220 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-1P50220 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nkx2-1P50220 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-1P50220 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-1P50220 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx2-1P50220 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.7■□□□□ 0.42
Nkx2-1P50220 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-1P50220 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-1P50220 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-1P50220 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx2-1P50220 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Nkx2-1P50220 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-1P50220 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nkx2-1P50220 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-1P50220 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-1P50220 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.68■□□□□ 0.42
Nkx2-1P50220 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
Nkx2-1P50220 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nkx2-1P50220 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-1P50220 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-1P50220 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nkx2-1P50220 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-1P50220 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx2-1P50220 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-1P50220 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.67■□□□□ 0.42
Nkx2-1P50220 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-1P50220 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-1P50220 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-1P50220 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-1P50220 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-1P50220 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx2-1P50220 Notumos-201ENSMUST00000151998 2659 ntBASIC17.66■□□□□ 0.42
Nkx2-1P50220 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-1P50220 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-1P50220 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-1P50220 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-1P50220 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.66■□□□□ 0.42
Nkx2-1P50220 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-1P50220 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-1P50220 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-1P50220 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-1P50220 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-1P50220 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-1P50220 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-1P50220 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-1P50220 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-1P50220 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Nkx2-1P50220 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-1P50220 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-1P50220 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-1P50220 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nkx2-1P50220 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.63■□□□□ 0.41
Nkx2-1P50220 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-1P50220 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-1P50220 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-1P50220 Gm7432-201ENSMUST00000210343 879 ntBASIC17.63■□□□□ 0.41
Nkx2-1P50220 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-1P50220 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nkx2-1P50220 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nkx2-1P50220 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nkx2-1P50220 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.62■□□□□ 0.41
Nkx2-1P50220 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-1P50220 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-1P50220 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-1P50220 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.62■□□□□ 0.41
Nkx2-1P50220 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-1P50220 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-1P50220 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-1P50220 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.62■□□□□ 0.41
Nkx2-1P50220 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nkx2-1P50220 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-1P50220 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-1P50220 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-1P50220 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-1P50220 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nkx2-1P50220 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-1P50220 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-1P50220 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.62■□□□□ 0.41
Nkx2-1P50220 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-1P50220 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.61■□□□□ 0.41
Nkx2-1P50220 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nkx2-1P50220 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-1P50220 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-1P50220 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-1P50220 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-1P50220 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.61■□□□□ 0.41
Nkx2-1P50220 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-1P50220 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.61■□□□□ 0.41
Nkx2-1P50220 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-1P50220 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-1P50220 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-1P50220 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.61■□□□□ 0.41
Nkx2-1P50220 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-1P50220 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-1P50220 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-1P50220 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms