Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rph3aP47708 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.6■□□□□ 0.89
Rph3aP47708 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rph3aP47708 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.6■□□□□ 0.89
Rph3aP47708 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rph3aP47708 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rph3aP47708 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rph3aP47708 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rph3aP47708 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rph3aP47708 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rph3aP47708 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rph3aP47708 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rph3aP47708 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rph3aP47708 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rph3aP47708 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rph3aP47708 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rph3aP47708 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rph3aP47708 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.58■□□□□ 0.88
Rph3aP47708 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rph3aP47708 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rph3aP47708 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Rph3aP47708 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rph3aP47708 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.57■□□□□ 0.88
Rph3aP47708 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rph3aP47708 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rph3aP47708 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rph3aP47708 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rph3aP47708 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rph3aP47708 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rph3aP47708 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rph3aP47708 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.56■□□□□ 0.88
Rph3aP47708 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.56■□□□□ 0.88
Rph3aP47708 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rph3aP47708 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rph3aP47708 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rph3aP47708 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rph3aP47708 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rph3aP47708 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rph3aP47708 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rph3aP47708 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rph3aP47708 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rph3aP47708 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.54■□□□□ 0.88
Rph3aP47708 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rph3aP47708 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.54■□□□□ 0.88
Rph3aP47708 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rph3aP47708 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rph3aP47708 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.53■□□□□ 0.88
Rph3aP47708 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.53■□□□□ 0.88
Rph3aP47708 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rph3aP47708 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rph3aP47708 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rph3aP47708 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rph3aP47708 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rph3aP47708 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rph3aP47708 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rph3aP47708 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rph3aP47708 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rph3aP47708 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rph3aP47708 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rph3aP47708 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rph3aP47708 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rph3aP47708 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rph3aP47708 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rph3aP47708 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rph3aP47708 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rph3aP47708 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rph3aP47708 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rph3aP47708 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rph3aP47708 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.51■□□□□ 0.87
Rph3aP47708 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rph3aP47708 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rph3aP47708 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rph3aP47708 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rph3aP47708 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rph3aP47708 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.5■□□□□ 0.87
Rph3aP47708 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.5■□□□□ 0.87
Rph3aP47708 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rph3aP47708 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rph3aP47708 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rph3aP47708 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rph3aP47708 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rph3aP47708 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rph3aP47708 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rph3aP47708 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rph3aP47708 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.48■□□□□ 0.87
Rph3aP47708 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.48■□□□□ 0.87
Rph3aP47708 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rph3aP47708 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rph3aP47708 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rph3aP47708 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.48■□□□□ 0.87
Rph3aP47708 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.48■□□□□ 0.87
Rph3aP47708 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rph3aP47708 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rph3aP47708 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rph3aP47708 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rph3aP47708 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rph3aP47708 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rph3aP47708 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rph3aP47708 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rph3aP47708 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms