Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox18P43680 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox18P43680 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox18P43680 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.63■□□□□ 0.89
Sox18P43680 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox18P43680 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sox18P43680 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox18P43680 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox18P43680 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Sox18P43680 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox18P43680 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
Sox18P43680 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Sox18P43680 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sox18P43680 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Sox18P43680 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sox18P43680 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox18P43680 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox18P43680 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox18P43680 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sox18P43680 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox18P43680 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox18P43680 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox18P43680 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.6■□□□□ 0.89
Sox18P43680 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sox18P43680 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.6■□□□□ 0.89
Sox18P43680 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox18P43680 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.59■□□□□ 0.89
Sox18P43680 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Sox18P43680 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
Sox18P43680 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.59■□□□□ 0.89
Sox18P43680 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.59■□□□□ 0.89
Sox18P43680 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox18P43680 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
Sox18P43680 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox18P43680 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox18P43680 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.58■□□□□ 0.89
Sox18P43680 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sox18P43680 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sox18P43680 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sox18P43680 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox18P43680 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox18P43680 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox18P43680 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sox18P43680 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox18P43680 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sox18P43680 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox18P43680 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sox18P43680 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
Sox18P43680 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.57■□□□□ 0.88
Sox18P43680 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox18P43680 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox18P43680 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox18P43680 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox18P43680 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox18P43680 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox18P43680 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox18P43680 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox18P43680 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sox18P43680 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox18P43680 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.55■□□□□ 0.88
Sox18P43680 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox18P43680 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sox18P43680 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.55■□□□□ 0.88
Sox18P43680 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sox18P43680 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox18P43680 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Sox18P43680 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox18P43680 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sox18P43680 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox18P43680 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox18P43680 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Sox18P43680 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.54■□□□□ 0.88
Sox18P43680 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox18P43680 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sox18P43680 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.53■□□□□ 0.88
Sox18P43680 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox18P43680 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox18P43680 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox18P43680 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.53■□□□□ 0.88
Sox18P43680 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Sox18P43680 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox18P43680 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.53■□□□□ 0.88
Sox18P43680 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox18P43680 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.52■□□□□ 0.88
Sox18P43680 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sox18P43680 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sox18P43680 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.87
Sox18P43680 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox18P43680 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox18P43680 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Sox18P43680 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.51■□□□□ 0.87
Sox18P43680 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox18P43680 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox18P43680 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Sox18P43680 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox18P43680 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.5■□□□□ 0.87
Sox18P43680 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox18P43680 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox18P43680 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox18P43680 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms