Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Cxcl12P40224 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
Cxcl12P40224 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cxcl12P40224 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.54■■□□□ 1.2
Cxcl12P40224 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cxcl12P40224 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cxcl12P40224 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Cxcl12P40224 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cxcl12P40224 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cxcl12P40224 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cxcl12P40224 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cxcl12P40224 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cxcl12P40224 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Cxcl12P40224 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
Cxcl12P40224 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.52■■□□□ 1.2
Cxcl12P40224 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.52■■□□□ 1.2
Cxcl12P40224 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.52■■□□□ 1.2
Cxcl12P40224 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cxcl12P40224 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cxcl12P40224 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Cxcl12P40224 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Cxcl12P40224 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cxcl12P40224 Gm29257-201ENSMUST00000186115 639 ntBASIC22.51■■□□□ 1.19
Cxcl12P40224 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cxcl12P40224 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Cxcl12P40224 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cxcl12P40224 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cxcl12P40224 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
Cxcl12P40224 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC22.5■■□□□ 1.19
Cxcl12P40224 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cxcl12P40224 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cxcl12P40224 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cxcl12P40224 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Cxcl12P40224 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cxcl12P40224 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.49■■□□□ 1.19
Cxcl12P40224 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cxcl12P40224 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cxcl12P40224 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.49■■□□□ 1.19
Cxcl12P40224 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
Cxcl12P40224 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.49■■□□□ 1.19
Cxcl12P40224 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cxcl12P40224 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.49■■□□□ 1.19
Cxcl12P40224 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Cxcl12P40224 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cxcl12P40224 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cxcl12P40224 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cxcl12P40224 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cxcl12P40224 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cxcl12P40224 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.47■■□□□ 1.19
Cxcl12P40224 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.47■■□□□ 1.19
Cxcl12P40224 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cxcl12P40224 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.47■■□□□ 1.19
Cxcl12P40224 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Cxcl12P40224 Gm6139-201ENSMUST00000079261 882 ntBASIC22.47■■□□□ 1.19
Cxcl12P40224 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cxcl12P40224 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cxcl12P40224 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cxcl12P40224 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Cxcl12P40224 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Cxcl12P40224 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cxcl12P40224 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cxcl12P40224 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cxcl12P40224 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cxcl12P40224 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cxcl12P40224 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cxcl12P40224 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cxcl12P40224 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.45■■□□□ 1.18
Cxcl12P40224 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cxcl12P40224 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Cxcl12P40224 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Cxcl12P40224 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Cxcl12P40224 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Cxcl12P40224 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cxcl12P40224 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.44■■□□□ 1.18
Cxcl12P40224 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.44■■□□□ 1.18
Cxcl12P40224 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cxcl12P40224 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cxcl12P40224 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cxcl12P40224 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.43■■□□□ 1.18
Cxcl12P40224 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cxcl12P40224 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC22.43■■□□□ 1.18
Cxcl12P40224 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cxcl12P40224 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.43■■□□□ 1.18
Cxcl12P40224 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.43■■□□□ 1.18
Cxcl12P40224 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.43■■□□□ 1.18
Cxcl12P40224 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cxcl12P40224 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Cxcl12P40224 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Cxcl12P40224 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cxcl12P40224 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cxcl12P40224 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cxcl12P40224 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcl12P40224 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcl12P40224 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcl12P40224 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Cxcl12P40224 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.41■■□□□ 1.18
Cxcl12P40224 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.41■■□□□ 1.18
Cxcl12P40224 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcl12P40224 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcl12P40224 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms