Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HmgclP38060 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HmgclP38060 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HmgclP38060 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HmgclP38060 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.22■□□□□ 0.99
HmgclP38060 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HmgclP38060 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.22■□□□□ 0.99
HmgclP38060 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HmgclP38060 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HmgclP38060 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HmgclP38060 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HmgclP38060 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.21■□□□□ 0.99
HmgclP38060 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.21■□□□□ 0.99
HmgclP38060 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.21■□□□□ 0.99
HmgclP38060 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.21■□□□□ 0.99
HmgclP38060 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HmgclP38060 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
HmgclP38060 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.2■□□□□ 0.98
HmgclP38060 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HmgclP38060 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.2■□□□□ 0.98
HmgclP38060 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HmgclP38060 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HmgclP38060 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HmgclP38060 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.2■□□□□ 0.98
HmgclP38060 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HmgclP38060 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HmgclP38060 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HmgclP38060 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.19■□□□□ 0.98
HmgclP38060 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HmgclP38060 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.19■□□□□ 0.98
HmgclP38060 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HmgclP38060 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HmgclP38060 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HmgclP38060 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.18■□□□□ 0.98
HmgclP38060 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HmgclP38060 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.18■□□□□ 0.98
HmgclP38060 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HmgclP38060 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HmgclP38060 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HmgclP38060 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.17■□□□□ 0.98
HmgclP38060 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HmgclP38060 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HmgclP38060 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HmgclP38060 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HmgclP38060 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HmgclP38060 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HmgclP38060 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HmgclP38060 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HmgclP38060 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HmgclP38060 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HmgclP38060 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HmgclP38060 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HmgclP38060 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.16■□□□□ 0.98
HmgclP38060 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HmgclP38060 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HmgclP38060 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.16■□□□□ 0.98
HmgclP38060 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HmgclP38060 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HmgclP38060 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HmgclP38060 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HmgclP38060 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HmgclP38060 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HmgclP38060 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HmgclP38060 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.15■□□□□ 0.98
HmgclP38060 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HmgclP38060 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HmgclP38060 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.14■□□□□ 0.97
HmgclP38060 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HmgclP38060 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HmgclP38060 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HmgclP38060 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HmgclP38060 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HmgclP38060 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
HmgclP38060 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HmgclP38060 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.13■□□□□ 0.97
HmgclP38060 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HmgclP38060 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HmgclP38060 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HmgclP38060 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HmgclP38060 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HmgclP38060 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HmgclP38060 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HmgclP38060 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HmgclP38060 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
HmgclP38060 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HmgclP38060 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.12■□□□□ 0.97
HmgclP38060 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HmgclP38060 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HmgclP38060 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
HmgclP38060 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HmgclP38060 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HmgclP38060 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HmgclP38060 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HmgclP38060 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.11■□□□□ 0.97
HmgclP38060 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.11■□□□□ 0.97
HmgclP38060 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.11■□□□□ 0.97
HmgclP38060 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HmgclP38060 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
HmgclP38060 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HmgclP38060 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms