Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cd28P31041 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd28P31041 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd28P31041 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.86■□□□□ 0.61
Cd28P31041 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cd28P31041 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd28P31041 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd28P31041 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd28P31041 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.86■□□□□ 0.61
Cd28P31041 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.85■□□□□ 0.61
Cd28P31041 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd28P31041 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cd28P31041 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Cd28P31041 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.85■□□□□ 0.61
Cd28P31041 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd28P31041 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Cd28P31041 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cd28P31041 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cd28P31041 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.84■□□□□ 0.61
Cd28P31041 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cd28P31041 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.84■□□□□ 0.61
Cd28P31041 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd28P31041 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd28P31041 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd28P31041 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.83■□□□□ 0.61
Cd28P31041 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd28P31041 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd28P31041 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.83■□□□□ 0.6
Cd28P31041 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.83■□□□□ 0.6
Cd28P31041 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd28P31041 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd28P31041 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cd28P31041 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd28P31041 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd28P31041 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd28P31041 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Cd28P31041 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cd28P31041 Gm9812-201ENSMUST00000061934 968 ntBASIC18.82■□□□□ 0.6
Cd28P31041 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd28P31041 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd28P31041 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd28P31041 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd28P31041 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd28P31041 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cd28P31041 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Cd28P31041 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cd28P31041 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cd28P31041 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd28P31041 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd28P31041 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd28P31041 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.8■□□□□ 0.6
Cd28P31041 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd28P31041 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd28P31041 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
Cd28P31041 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd28P31041 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd28P31041 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd28P31041 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd28P31041 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.79■□□□□ 0.6
Cd28P31041 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.79■□□□□ 0.6
Cd28P31041 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cd28P31041 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cd28P31041 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd28P31041 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd28P31041 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd28P31041 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Cd28P31041 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd28P31041 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd28P31041 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd28P31041 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd28P31041 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd28P31041 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd28P31041 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cd28P31041 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cd28P31041 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cd28P31041 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cd28P31041 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.77■□□□□ 0.6
Cd28P31041 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cd28P31041 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cd28P31041 Terc-201ENSMUST00000082862 423 ntBASIC18.76■□□□□ 0.59
Cd28P31041 Notumos-201ENSMUST00000151998 2659 ntBASIC18.76■□□□□ 0.59
Cd28P31041 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cd28P31041 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd28P31041 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cd28P31041 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cd28P31041 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.75■□□□□ 0.59
Cd28P31041 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.75■□□□□ 0.59
Cd28P31041 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd28P31041 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.74■□□□□ 0.59
Cd28P31041 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.74■□□□□ 0.59
Cd28P31041 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd28P31041 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd28P31041 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd28P31041 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cd28P31041 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd28P31041 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cd28P31041 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd28P31041 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cd28P31041 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd28P31041 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms