Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nckap1P28660 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nckap1P28660 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.37■■□□□ 1.01
Nckap1P28660 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.37■■□□□ 1.01
Nckap1P28660 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nckap1P28660 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nckap1P28660 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nckap1P28660 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Nckap1P28660 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.36■■□□□ 1.01
Nckap1P28660 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nckap1P28660 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Nckap1P28660 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nckap1P28660 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.36■■□□□ 1.01
Nckap1P28660 Gm40881-201ENSMUST00000223397 166 ntBASIC21.36■■□□□ 1.01
Nckap1P28660 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Nckap1P28660 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nckap1P28660 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nckap1P28660 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nckap1P28660 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Nckap1P28660 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nckap1P28660 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nckap1P28660 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nckap1P28660 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nckap1P28660 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.34■■□□□ 1.01
Nckap1P28660 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nckap1P28660 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nckap1P28660 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nckap1P28660 Gm10399-202ENSMUST00000202768 748 ntBASIC21.33■■□□□ 1.01
Nckap1P28660 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Nckap1P28660 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.33■■□□□ 1
Nckap1P28660 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nckap1P28660 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.32■■□□□ 1
Nckap1P28660 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.32■■□□□ 1
Nckap1P28660 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nckap1P28660 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.32■■□□□ 1
Nckap1P28660 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Nckap1P28660 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Nckap1P28660 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nckap1P28660 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nckap1P28660 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nckap1P28660 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.31■■□□□ 1
Nckap1P28660 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Nckap1P28660 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nckap1P28660 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nckap1P28660 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nckap1P28660 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nckap1P28660 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.3■■□□□ 1
Nckap1P28660 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.3■■□□□ 1
Nckap1P28660 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.3■■□□□ 1
Nckap1P28660 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nckap1P28660 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nckap1P28660 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.3■■□□□ 1
Nckap1P28660 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nckap1P28660 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Nckap1P28660 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.29■■□□□ 1
Nckap1P28660 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.29■■□□□ 1
Nckap1P28660 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nckap1P28660 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Nckap1P28660 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Nckap1P28660 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Nckap1P28660 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.28■■□□□ 1
Nckap1P28660 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nckap1P28660 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nckap1P28660 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Nckap1P28660 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nckap1P28660 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nckap1P28660 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.27■■□□□ 1
Nckap1P28660 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.27■■□□□ 1
Nckap1P28660 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nckap1P28660 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nckap1P28660 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.26■□□□□ 0.99
Nckap1P28660 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nckap1P28660 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nckap1P28660 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nckap1P28660 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nckap1P28660 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Nckap1P28660 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nckap1P28660 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.24■□□□□ 0.99
Nckap1P28660 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Nckap1P28660 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nckap1P28660 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.24■□□□□ 0.99
Nckap1P28660 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Nckap1P28660 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nckap1P28660 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nckap1P28660 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nckap1P28660 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nckap1P28660 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nckap1P28660 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nckap1P28660 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nckap1P28660 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nckap1P28660 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nckap1P28660 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nckap1P28660 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nckap1P28660 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nckap1P28660 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nckap1P28660 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nckap1P28660 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nckap1P28660 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Nckap1P28660 Gm22238-201ENSMUST00000175222 88 ntBASIC21.22■□□□□ 0.99
Nckap1P28660 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms