Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clk1P22518 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.78■□□□□ 0.76
Clk1P22518 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.78■□□□□ 0.76
Clk1P22518 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clk1P22518 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clk1P22518 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clk1P22518 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clk1P22518 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clk1P22518 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clk1P22518 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clk1P22518 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Clk1P22518 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Clk1P22518 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clk1P22518 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clk1P22518 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clk1P22518 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clk1P22518 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Clk1P22518 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Clk1P22518 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clk1P22518 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.76■□□□□ 0.75
Clk1P22518 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clk1P22518 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clk1P22518 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Clk1P22518 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clk1P22518 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clk1P22518 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Clk1P22518 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clk1P22518 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clk1P22518 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Clk1P22518 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clk1P22518 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clk1P22518 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clk1P22518 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clk1P22518 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.74■□□□□ 0.75
Clk1P22518 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.74■□□□□ 0.75
Clk1P22518 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Clk1P22518 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clk1P22518 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clk1P22518 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clk1P22518 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.74■□□□□ 0.75
Clk1P22518 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clk1P22518 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clk1P22518 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Clk1P22518 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clk1P22518 Gm10420-201ENSMUST00000121713 882 ntBASIC19.73■□□□□ 0.75
Clk1P22518 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clk1P22518 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clk1P22518 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clk1P22518 Cap2-205ENSMUST00000225824 1634 ntBASIC19.73■□□□□ 0.75
Clk1P22518 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Clk1P22518 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Clk1P22518 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk1P22518 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk1P22518 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clk1P22518 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk1P22518 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk1P22518 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk1P22518 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.71■□□□□ 0.75
Clk1P22518 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Clk1P22518 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk1P22518 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.71■□□□□ 0.75
Clk1P22518 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk1P22518 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk1P22518 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk1P22518 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Clk1P22518 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clk1P22518 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clk1P22518 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clk1P22518 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clk1P22518 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.7■□□□□ 0.74
Clk1P22518 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clk1P22518 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clk1P22518 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk1P22518 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.69■□□□□ 0.74
Clk1P22518 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk1P22518 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk1P22518 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clk1P22518 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk1P22518 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk1P22518 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk1P22518 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk1P22518 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk1P22518 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clk1P22518 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk1P22518 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk1P22518 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk1P22518 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk1P22518 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk1P22518 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.66■□□□□ 0.74
Clk1P22518 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clk1P22518 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clk1P22518 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clk1P22518 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Clk1P22518 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.66■□□□□ 0.74
Clk1P22518 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clk1P22518 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Clk1P22518 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk1P22518 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Clk1P22518 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.65■□□□□ 0.74
Clk1P22518 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms