Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BdnfP21237 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BdnfP21237 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BdnfP21237 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BdnfP21237 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
BdnfP21237 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
BdnfP21237 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BdnfP21237 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.45■□□□□ 0.86
BdnfP21237 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
BdnfP21237 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BdnfP21237 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
BdnfP21237 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.45■□□□□ 0.86
BdnfP21237 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.45■□□□□ 0.86
BdnfP21237 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BdnfP21237 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
BdnfP21237 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BdnfP21237 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
BdnfP21237 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BdnfP21237 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
BdnfP21237 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
BdnfP21237 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
BdnfP21237 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.43■□□□□ 0.86
BdnfP21237 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
BdnfP21237 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
BdnfP21237 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BdnfP21237 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.43■□□□□ 0.86
BdnfP21237 Gm9806-201ENSMUST00000051080 552 ntBASIC20.43■□□□□ 0.86
BdnfP21237 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BdnfP21237 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BdnfP21237 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
BdnfP21237 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
BdnfP21237 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BdnfP21237 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BdnfP21237 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
BdnfP21237 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BdnfP21237 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.42■□□□□ 0.86
BdnfP21237 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
BdnfP21237 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BdnfP21237 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
BdnfP21237 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BdnfP21237 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BdnfP21237 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
BdnfP21237 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
BdnfP21237 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.41■□□□□ 0.86
BdnfP21237 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BdnfP21237 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
BdnfP21237 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BdnfP21237 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
BdnfP21237 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BdnfP21237 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
BdnfP21237 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BdnfP21237 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
BdnfP21237 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BdnfP21237 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.39■□□□□ 0.85
BdnfP21237 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BdnfP21237 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BdnfP21237 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BdnfP21237 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.39■□□□□ 0.85
BdnfP21237 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BdnfP21237 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BdnfP21237 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.38■□□□□ 0.85
BdnfP21237 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BdnfP21237 Gm44428-201ENSMUST00000204474 874 ntBASIC20.38■□□□□ 0.85
BdnfP21237 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
BdnfP21237 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BdnfP21237 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BdnfP21237 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BdnfP21237 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BdnfP21237 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BdnfP21237 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BdnfP21237 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BdnfP21237 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BdnfP21237 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
BdnfP21237 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BdnfP21237 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.36■□□□□ 0.85
BdnfP21237 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BdnfP21237 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BdnfP21237 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
BdnfP21237 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
BdnfP21237 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BdnfP21237 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
BdnfP21237 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BdnfP21237 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BdnfP21237 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
BdnfP21237 Gm11687-201ENSMUST00000118911 886 ntBASIC20.34■□□□□ 0.85
BdnfP21237 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.34■□□□□ 0.85
BdnfP21237 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.34■□□□□ 0.85
BdnfP21237 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BdnfP21237 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
BdnfP21237 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BdnfP21237 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BdnfP21237 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BdnfP21237 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BdnfP21237 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BdnfP21237 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BdnfP21237 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
BdnfP21237 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BdnfP21237 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BdnfP21237 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BdnfP21237 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms