Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Cntn1P12960 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cntn1P12960 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cntn1P12960 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cntn1P12960 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cntn1P12960 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.57■□□□□ 0.88
Cntn1P12960 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cntn1P12960 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cntn1P12960 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.56■□□□□ 0.88
Cntn1P12960 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cntn1P12960 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cntn1P12960 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Cntn1P12960 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cntn1P12960 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.56■□□□□ 0.88
Cntn1P12960 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cntn1P12960 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cntn1P12960 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cntn1P12960 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cntn1P12960 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cntn1P12960 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cntn1P12960 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cntn1P12960 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cntn1P12960 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cntn1P12960 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cntn1P12960 Gm22567-201ENSMUST00000175542 342 ntBASIC20.55■□□□□ 0.88
Cntn1P12960 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.55■□□□□ 0.88
Cntn1P12960 Rps24-207ENSMUST00000224568 714 ntBASIC20.55■□□□□ 0.88
Cntn1P12960 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cntn1P12960 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cntn1P12960 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cntn1P12960 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cntn1P12960 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cntn1P12960 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.54■□□□□ 0.88
Cntn1P12960 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cntn1P12960 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cntn1P12960 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cntn1P12960 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.53■□□□□ 0.88
Cntn1P12960 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cntn1P12960 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cntn1P12960 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cntn1P12960 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cntn1P12960 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cntn1P12960 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cntn1P12960 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cntn1P12960 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cntn1P12960 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cntn1P12960 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.52■□□□□ 0.88
Cntn1P12960 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.52■□□□□ 0.88
Cntn1P12960 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cntn1P12960 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cntn1P12960 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cntn1P12960 Gm9959-201ENSMUST00000068277 390 ntBASIC20.51■□□□□ 0.87
Cntn1P12960 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.51■□□□□ 0.87
Cntn1P12960 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cntn1P12960 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cntn1P12960 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cntn1P12960 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cntn1P12960 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cntn1P12960 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cntn1P12960 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cntn1P12960 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cntn1P12960 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cntn1P12960 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cntn1P12960 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.5■□□□□ 0.87
Cntn1P12960 Gm14117-201ENSMUST00000122417 843 ntBASIC20.49■□□□□ 0.87
Cntn1P12960 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.49■□□□□ 0.87
Cntn1P12960 Gm45102-201ENSMUST00000207427 857 ntBASIC20.49■□□□□ 0.87
Cntn1P12960 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cntn1P12960 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cntn1P12960 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.49■□□□□ 0.87
Cntn1P12960 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cntn1P12960 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cntn1P12960 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cntn1P12960 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.48■□□□□ 0.87
Cntn1P12960 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.48■□□□□ 0.87
Cntn1P12960 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cntn1P12960 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cntn1P12960 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cntn1P12960 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cntn1P12960 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cntn1P12960 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cntn1P12960 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.47■□□□□ 0.87
Cntn1P12960 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cntn1P12960 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.47■□□□□ 0.87
Cntn1P12960 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Cntn1P12960 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cntn1P12960 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Cntn1P12960 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cntn1P12960 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cntn1P12960 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cntn1P12960 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cntn1P12960 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cntn1P12960 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cntn1P12960 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cntn1P12960 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cntn1P12960 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cntn1P12960 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.46■□□□□ 0.87
Cntn1P12960 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cntn1P12960 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.45■□□□□ 0.86
Cntn1P12960 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms