Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P06328 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
P06328 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06328 Scarna2-201ENSMUST00000157560 414 ntBASIC15.68■□□□□ 0.1
P06328 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.68■□□□□ 0.1
P06328 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06328 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
P06328 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P06328 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P06328 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06328 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
P06328 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06328 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06328 Gm9806-201ENSMUST00000051080 552 ntBASIC15.67■□□□□ 0.1
P06328 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
P06328 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.67■□□□□ 0.1
P06328 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.67■□□□□ 0.1
P06328 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
P06328 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P06328 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.66■□□□□ 0.1
P06328 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P06328 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P06328 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P06328 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.66■□□□□ 0.1
P06328 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P06328 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P06328 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
P06328 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
P06328 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
P06328 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P06328 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P06328 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P06328 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P06328 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P06328 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.65■□□□□ 0.1
P06328 Gm16437-201ENSMUST00000025669 507 ntBASIC15.65■□□□□ 0.1
P06328 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
P06328 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P06328 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P06328 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
P06328 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P06328 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.64■□□□□ 0.09
P06328 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
P06328 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
P06328 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.64■□□□□ 0.09
P06328 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
P06328 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
P06328 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P06328 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P06328 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P06328 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
P06328 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P06328 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P06328 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.63■□□□□ 0.09
P06328 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P06328 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P06328 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P06328 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
P06328 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P06328 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
P06328 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P06328 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P06328 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.62■□□□□ 0.09
P06328 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P06328 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
P06328 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.62■□□□□ 0.09
P06328 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
P06328 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.61■□□□□ 0.09
P06328 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P06328 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P06328 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
P06328 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
P06328 Gm11687-201ENSMUST00000118911 886 ntBASIC15.6■□□□□ 0.09
P06328 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.6■□□□□ 0.09
P06328 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
P06328 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
P06328 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
P06328 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
P06328 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
P06328 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
P06328 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
P06328 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
P06328 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
P06328 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
P06328 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
P06328 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
P06328 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
P06328 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
P06328 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
P06328 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
P06328 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
P06328 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
P06328 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.58■□□□□ 0.08
P06328 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
P06328 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
P06328 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
P06328 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
P06328 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
P06328 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
P06328 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms