Protein–RNA interactions for Protein: P01801

Ig heavy chain V-III region J606, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01801 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01801 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
P01801 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.21■□□□□ 0.34
P01801 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
P01801 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01801 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
P01801 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01801 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01801 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
P01801 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P01801 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.19■□□□□ 0.34
P01801 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.19■□□□□ 0.34
P01801 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P01801 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
P01801 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P01801 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P01801 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01801 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
P01801 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.18■□□□□ 0.34
P01801 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.18■□□□□ 0.34
P01801 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01801 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
P01801 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01801 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01801 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01801 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
P01801 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01801 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01801 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P01801 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P01801 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01801 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.17■□□□□ 0.34
P01801 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P01801 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
P01801 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01801 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01801 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.17■□□□□ 0.34
P01801 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01801 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P01801 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01801 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01801 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01801 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.16■□□□□ 0.34
P01801 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01801 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
P01801 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
P01801 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.16■□□□□ 0.34
P01801 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01801 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01801 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.15■□□□□ 0.34
P01801 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01801 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
P01801 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01801 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01801 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.15■□□□□ 0.34
P01801 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01801 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
P01801 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.14■□□□□ 0.33
P01801 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P01801 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P01801 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
P01801 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.14■□□□□ 0.33
P01801 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01801 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01801 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P01801 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.13■□□□□ 0.33
P01801 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.13■□□□□ 0.33
P01801 Gm40881-201ENSMUST00000223397 166 ntBASIC17.13■□□□□ 0.33
P01801 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01801 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
P01801 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01801 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.12■□□□□ 0.33
P01801 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
P01801 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.12■□□□□ 0.33
P01801 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01801 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.12■□□□□ 0.33
P01801 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01801 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01801 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01801 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01801 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01801 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01801 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01801 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01801 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01801 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
P01801 Gm10399-202ENSMUST00000202768 748 ntBASIC17.11■□□□□ 0.33
P01801 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01801 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01801 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01801 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01801 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01801 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.1■□□□□ 0.33
P01801 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01801 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.1■□□□□ 0.33
P01801 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01801 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01801 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
P01801 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01801 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms