Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.39■□□□□ 0.86
Hcn1O88704 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Hcn1O88704 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Hcn1O88704 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hcn1O88704 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Hcn1O88704 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hcn1O88704 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hcn1O88704 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hcn1O88704 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Hcn1O88704 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Hcn1O88704 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hcn1O88704 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hcn1O88704 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hcn1O88704 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.37■□□□□ 0.85
Hcn1O88704 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcn1O88704 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.37■□□□□ 0.85
Hcn1O88704 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hcn1O88704 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.37■□□□□ 0.85
Hcn1O88704 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Hcn1O88704 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Hcn1O88704 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcn1O88704 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcn1O88704 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Hcn1O88704 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hcn1O88704 Notumos-201ENSMUST00000151998 2659 ntBASIC20.36■□□□□ 0.85
Hcn1O88704 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hcn1O88704 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hcn1O88704 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Hcn1O88704 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hcn1O88704 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hcn1O88704 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hcn1O88704 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hcn1O88704 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hcn1O88704 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hcn1O88704 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn1O88704 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn1O88704 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn1O88704 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn1O88704 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn1O88704 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn1O88704 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn1O88704 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn1O88704 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn1O88704 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn1O88704 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Hcn1O88704 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Hcn1O88704 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hcn1O88704 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.34■□□□□ 0.85
Hcn1O88704 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.34■□□□□ 0.85
Hcn1O88704 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hcn1O88704 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hcn1O88704 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hcn1O88704 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Hcn1O88704 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hcn1O88704 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hcn1O88704 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Hcn1O88704 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hcn1O88704 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Hcn1O88704 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hcn1O88704 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hcn1O88704 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hcn1O88704 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hcn1O88704 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hcn1O88704 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hcn1O88704 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hcn1O88704 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hcn1O88704 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Hcn1O88704 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hcn1O88704 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hcn1O88704 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Hcn1O88704 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn1O88704 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn1O88704 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn1O88704 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn1O88704 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn1O88704 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn1O88704 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn1O88704 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn1O88704 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hcn1O88704 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Hcn1O88704 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.29■□□□□ 0.84
Hcn1O88704 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hcn1O88704 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hcn1O88704 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Hcn1O88704 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hcn1O88704 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hcn1O88704 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hcn1O88704 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Hcn1O88704 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Hcn1O88704 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hcn1O88704 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.27■□□□□ 0.84
Hcn1O88704 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Hcn1O88704 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Hcn1O88704 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hcn1O88704 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hcn1O88704 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hcn1O88704 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Hcn1O88704 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.26■□□□□ 0.83
Hcn1O88704 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.26■□□□□ 0.83
Hcn1O88704 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms