Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tgfbr3O88393 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tgfbr3O88393 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tgfbr3O88393 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.58■□□□□ 0.89
Tgfbr3O88393 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.58■□□□□ 0.89
Tgfbr3O88393 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tgfbr3O88393 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tgfbr3O88393 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tgfbr3O88393 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tgfbr3O88393 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tgfbr3O88393 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tgfbr3O88393 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tgfbr3O88393 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.57■□□□□ 0.88
Tgfbr3O88393 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.57■□□□□ 0.88
Tgfbr3O88393 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tgfbr3O88393 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tgfbr3O88393 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tgfbr3O88393 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.56■□□□□ 0.88
Tgfbr3O88393 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.56■□□□□ 0.88
Tgfbr3O88393 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tgfbr3O88393 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tgfbr3O88393 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tgfbr3O88393 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tgfbr3O88393 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.55■□□□□ 0.88
Tgfbr3O88393 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tgfbr3O88393 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tgfbr3O88393 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tgfbr3O88393 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tgfbr3O88393 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tgfbr3O88393 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tgfbr3O88393 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tgfbr3O88393 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.54■□□□□ 0.88
Tgfbr3O88393 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tgfbr3O88393 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbr3O88393 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbr3O88393 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Tgfbr3O88393 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbr3O88393 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.53■□□□□ 0.88
Tgfbr3O88393 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbr3O88393 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbr3O88393 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbr3O88393 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfbr3O88393 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.52■□□□□ 0.88
Tgfbr3O88393 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tgfbr3O88393 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tgfbr3O88393 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Tgfbr3O88393 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbr3O88393 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.51■□□□□ 0.87
Tgfbr3O88393 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.51■□□□□ 0.87
Tgfbr3O88393 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfbr3O88393 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbr3O88393 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbr3O88393 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbr3O88393 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tgfbr3O88393 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
Tgfbr3O88393 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbr3O88393 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.5■□□□□ 0.87
Tgfbr3O88393 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbr3O88393 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbr3O88393 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfbr3O88393 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfbr3O88393 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfbr3O88393 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfbr3O88393 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfbr3O88393 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfbr3O88393 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfbr3O88393 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tgfbr3O88393 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.48■□□□□ 0.87
Tgfbr3O88393 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.48■□□□□ 0.87
Tgfbr3O88393 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tgfbr3O88393 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.48■□□□□ 0.87
Tgfbr3O88393 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tgfbr3O88393 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.47■□□□□ 0.87
Tgfbr3O88393 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tgfbr3O88393 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tgfbr3O88393 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tgfbr3O88393 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tgfbr3O88393 Gm12821-201ENSMUST00000120022 600 ntBASIC20.46■□□□□ 0.87
Tgfbr3O88393 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tgfbr3O88393 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Tgfbr3O88393 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.46■□□□□ 0.87
Tgfbr3O88393 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
Tgfbr3O88393 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.46■□□□□ 0.87
Tgfbr3O88393 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tgfbr3O88393 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbr3O88393 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbr3O88393 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbr3O88393 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbr3O88393 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbr3O88393 Gm27454-201ENSMUST00000185090 204 ntBASIC20.45■□□□□ 0.86
Tgfbr3O88393 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbr3O88393 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tgfbr3O88393 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tgfbr3O88393 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Tgfbr3O88393 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tgfbr3O88393 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tgfbr3O88393 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tgfbr3O88393 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tgfbr3O88393 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.44■□□□□ 0.86
Tgfbr3O88393 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms