Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cbx4O55187 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21■□□□□ 0.95
Cbx4O55187 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cbx4O55187 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21■□□□□ 0.95
Cbx4O55187 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cbx4O55187 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cbx4O55187 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cbx4O55187 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cbx4O55187 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.99■□□□□ 0.95
Cbx4O55187 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cbx4O55187 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.99■□□□□ 0.95
Cbx4O55187 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cbx4O55187 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
Cbx4O55187 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cbx4O55187 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cbx4O55187 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.98■□□□□ 0.95
Cbx4O55187 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cbx4O55187 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Cbx4O55187 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Cbx4O55187 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cbx4O55187 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cbx4O55187 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cbx4O55187 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cbx4O55187 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cbx4O55187 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cbx4O55187 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.96■□□□□ 0.95
Cbx4O55187 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cbx4O55187 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.96■□□□□ 0.95
Cbx4O55187 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cbx4O55187 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.96■□□□□ 0.95
Cbx4O55187 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.96■□□□□ 0.95
Cbx4O55187 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.96■□□□□ 0.95
Cbx4O55187 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.95■□□□□ 0.94
Cbx4O55187 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cbx4O55187 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cbx4O55187 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cbx4O55187 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cbx4O55187 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cbx4O55187 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cbx4O55187 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cbx4O55187 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cbx4O55187 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cbx4O55187 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cbx4O55187 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cbx4O55187 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cbx4O55187 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.94■□□□□ 0.94
Cbx4O55187 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Cbx4O55187 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cbx4O55187 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cbx4O55187 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.93■□□□□ 0.94
Cbx4O55187 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cbx4O55187 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cbx4O55187 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cbx4O55187 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cbx4O55187 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cbx4O55187 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.92■□□□□ 0.94
Cbx4O55187 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.92■□□□□ 0.94
Cbx4O55187 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cbx4O55187 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cbx4O55187 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.91■□□□□ 0.94
Cbx4O55187 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cbx4O55187 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cbx4O55187 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cbx4O55187 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.9■□□□□ 0.94
Cbx4O55187 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cbx4O55187 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cbx4O55187 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cbx4O55187 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.9■□□□□ 0.94
Cbx4O55187 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cbx4O55187 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cbx4O55187 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cbx4O55187 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.89■□□□□ 0.94
Cbx4O55187 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cbx4O55187 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cbx4O55187 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.89■□□□□ 0.93
Cbx4O55187 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cbx4O55187 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cbx4O55187 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cbx4O55187 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.88■□□□□ 0.93
Cbx4O55187 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cbx4O55187 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cbx4O55187 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cbx4O55187 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cbx4O55187 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cbx4O55187 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cbx4O55187 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cbx4O55187 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cbx4O55187 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cbx4O55187 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cbx4O55187 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.88■□□□□ 0.93
Cbx4O55187 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cbx4O55187 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cbx4O55187 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cbx4O55187 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cbx4O55187 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cbx4O55187 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cbx4O55187 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cbx4O55187 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cbx4O55187 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cbx4O55187 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms