Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.35■■□□□ 1.17
Per2O54943 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Per2O54943 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Per2O54943 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Per2O54943 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.34■■□□□ 1.17
Per2O54943 Gm12366-201ENSMUST00000121722 873 ntBASIC22.34■■□□□ 1.17
Per2O54943 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.34■■□□□ 1.17
Per2O54943 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.34■■□□□ 1.17
Per2O54943 Gm5786-201ENSMUST00000085368 882 ntBASIC22.34■■□□□ 1.17
Per2O54943 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Per2O54943 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Per2O54943 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Per2O54943 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Per2O54943 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Per2O54943 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Per2O54943 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Per2O54943 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Per2O54943 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Per2O54943 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Per2O54943 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Per2O54943 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
Per2O54943 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Per2O54943 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.16
Per2O54943 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Per2O54943 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Per2O54943 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.32■■□□□ 1.16
Per2O54943 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Per2O54943 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Per2O54943 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Per2O54943 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Per2O54943 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Per2O54943 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Per2O54943 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Per2O54943 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Per2O54943 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.31■■□□□ 1.16
Per2O54943 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Per2O54943 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Per2O54943 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.31■■□□□ 1.16
Per2O54943 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Per2O54943 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Per2O54943 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.31■■□□□ 1.16
Per2O54943 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.31■■□□□ 1.16
Per2O54943 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Per2O54943 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Per2O54943 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Per2O54943 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Per2O54943 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Per2O54943 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Per2O54943 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Per2O54943 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Per2O54943 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Per2O54943 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Per2O54943 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Per2O54943 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Per2O54943 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Per2O54943 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Per2O54943 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Per2O54943 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Per2O54943 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Per2O54943 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Per2O54943 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Per2O54943 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.29■■□□□ 1.16
Per2O54943 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Per2O54943 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Per2O54943 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.28■■□□□ 1.16
Per2O54943 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.28■■□□□ 1.16
Per2O54943 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Per2O54943 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Per2O54943 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.27■■□□□ 1.16
Per2O54943 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.27■■□□□ 1.16
Per2O54943 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.27■■□□□ 1.16
Per2O54943 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Per2O54943 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Per2O54943 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.26■■□□□ 1.15
Per2O54943 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.26■■□□□ 1.15
Per2O54943 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Per2O54943 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Per2O54943 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
Per2O54943 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.25■■□□□ 1.15
Per2O54943 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Per2O54943 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Per2O54943 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Per2O54943 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Per2O54943 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Per2O54943 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Per2O54943 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.24■■□□□ 1.15
Per2O54943 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Per2O54943 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.24■■□□□ 1.15
Per2O54943 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Per2O54943 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Per2O54943 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Per2O54943 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Per2O54943 Gm10420-201ENSMUST00000121713 882 ntBASIC22.23■■□□□ 1.15
Per2O54943 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Per2O54943 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.23■■□□□ 1.15
Per2O54943 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Per2O54943 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Per2O54943 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Per2O54943 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Per2O54943 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 158.8 ms