Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.9■□□□□ 0.3
Efnb3O35393 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Efnb3O35393 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Efnb3O35393 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Efnb3O35393 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Efnb3O35393 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Efnb3O35393 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Efnb3O35393 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Efnb3O35393 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Efnb3O35393 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Efnb3O35393 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.89■□□□□ 0.29
Efnb3O35393 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Efnb3O35393 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Efnb3O35393 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.88■□□□□ 0.29
Efnb3O35393 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Efnb3O35393 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Efnb3O35393 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Efnb3O35393 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Efnb3O35393 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.88■□□□□ 0.29
Efnb3O35393 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Efnb3O35393 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Efnb3O35393 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Efnb3O35393 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Efnb3O35393 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Efnb3O35393 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Efnb3O35393 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.87■□□□□ 0.29
Efnb3O35393 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Efnb3O35393 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Efnb3O35393 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Efnb3O35393 Notumos-201ENSMUST00000151998 2659 ntBASIC16.87■□□□□ 0.29
Efnb3O35393 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.87■□□□□ 0.29
Efnb3O35393 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Efnb3O35393 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.87■□□□□ 0.29
Efnb3O35393 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Efnb3O35393 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Efnb3O35393 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Efnb3O35393 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Efnb3O35393 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Efnb3O35393 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Efnb3O35393 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Efnb3O35393 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.85■□□□□ 0.29
Efnb3O35393 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Efnb3O35393 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Efnb3O35393 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Efnb3O35393 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Efnb3O35393 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.84■□□□□ 0.29
Efnb3O35393 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.84■□□□□ 0.29
Efnb3O35393 Terc-201ENSMUST00000082862 423 ntBASIC16.84■□□□□ 0.29
Efnb3O35393 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
Efnb3O35393 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Efnb3O35393 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Efnb3O35393 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Efnb3O35393 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Efnb3O35393 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Efnb3O35393 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Efnb3O35393 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Efnb3O35393 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Efnb3O35393 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.83■□□□□ 0.28
Efnb3O35393 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.83■□□□□ 0.28
Efnb3O35393 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Efnb3O35393 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Efnb3O35393 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Efnb3O35393 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Efnb3O35393 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Efnb3O35393 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Efnb3O35393 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Efnb3O35393 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Efnb3O35393 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.82■□□□□ 0.28
Efnb3O35393 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Efnb3O35393 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Efnb3O35393 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Efnb3O35393 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.81■□□□□ 0.28
Efnb3O35393 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Efnb3O35393 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Efnb3O35393 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Efnb3O35393 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Efnb3O35393 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Efnb3O35393 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.8■□□□□ 0.28
Efnb3O35393 Mir3960-201ENSMUST00000198213 73 ntBASIC16.8■□□□□ 0.28
Efnb3O35393 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.8■□□□□ 0.28
Efnb3O35393 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Efnb3O35393 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Efnb3O35393 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Efnb3O35393 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Efnb3O35393 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Efnb3O35393 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.8■□□□□ 0.28
Efnb3O35393 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Efnb3O35393 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Efnb3O35393 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Efnb3O35393 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Efnb3O35393 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Efnb3O35393 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Efnb3O35393 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Efnb3O35393 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Efnb3O35393 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Efnb3O35393 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Efnb3O35393 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Efnb3O35393 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Efnb3O35393 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Efnb3O35393 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms