Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Capn1O35350 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Capn1O35350 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.72■□□□□ 0.75
Capn1O35350 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Capn1O35350 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Capn1O35350 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Capn1O35350 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Capn1O35350 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Capn1O35350 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.71■□□□□ 0.75
Capn1O35350 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Capn1O35350 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Capn1O35350 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Capn1O35350 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Capn1O35350 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Capn1O35350 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Capn1O35350 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Capn1O35350 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Capn1O35350 Gm14117-201ENSMUST00000122417 843 ntBASIC19.7■□□□□ 0.74
Capn1O35350 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.7■□□□□ 0.74
Capn1O35350 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Capn1O35350 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Capn1O35350 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Capn1O35350 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Capn1O35350 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Capn1O35350 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Capn1O35350 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Capn1O35350 Gm9959-201ENSMUST00000068277 390 ntBASIC19.69■□□□□ 0.74
Capn1O35350 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Capn1O35350 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Capn1O35350 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Capn1O35350 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.68■□□□□ 0.74
Capn1O35350 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Capn1O35350 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Capn1O35350 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Capn1O35350 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Capn1O35350 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Capn1O35350 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Capn1O35350 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Capn1O35350 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.68■□□□□ 0.74
Capn1O35350 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Capn1O35350 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.67■□□□□ 0.74
Capn1O35350 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Capn1O35350 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Capn1O35350 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Capn1O35350 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Capn1O35350 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Capn1O35350 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Capn1O35350 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Capn1O35350 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.66■□□□□ 0.74
Capn1O35350 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Capn1O35350 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Capn1O35350 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Capn1O35350 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Capn1O35350 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Capn1O35350 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Capn1O35350 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Capn1O35350 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.65■□□□□ 0.74
Capn1O35350 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Capn1O35350 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Capn1O35350 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Capn1O35350 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Capn1O35350 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Capn1O35350 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Capn1O35350 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Capn1O35350 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Capn1O35350 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Capn1O35350 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Capn1O35350 Gm10232-201ENSMUST00000089221 720 ntBASIC19.64■□□□□ 0.73
Capn1O35350 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Capn1O35350 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Capn1O35350 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Capn1O35350 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.63■□□□□ 0.73
Capn1O35350 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Capn1O35350 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Capn1O35350 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Capn1O35350 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Capn1O35350 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Capn1O35350 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Capn1O35350 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Capn1O35350 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Capn1O35350 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Capn1O35350 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Capn1O35350 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Capn1O35350 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Capn1O35350 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
Capn1O35350 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Capn1O35350 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Capn1O35350 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Capn1O35350 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Capn1O35350 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Capn1O35350 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Capn1O35350 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Capn1O35350 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Capn1O35350 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Capn1O35350 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.59■□□□□ 0.73
Capn1O35350 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Capn1O35350 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Capn1O35350 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Capn1O35350 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Capn1O35350 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms