Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufb11O09111 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufb11O09111 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufb11O09111 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.25■□□□□ 0.35
Ndufb11O09111 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufb11O09111 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufb11O09111 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ndufb11O09111 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufb11O09111 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufb11O09111 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufb11O09111 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufb11O09111 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufb11O09111 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufb11O09111 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufb11O09111 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufb11O09111 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufb11O09111 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufb11O09111 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.24■□□□□ 0.35
Ndufb11O09111 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufb11O09111 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufb11O09111 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufb11O09111 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufb11O09111 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufb11O09111 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufb11O09111 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufb11O09111 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufb11O09111 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufb11O09111 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ndufb11O09111 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ndufb11O09111 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ndufb11O09111 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ndufb11O09111 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ndufb11O09111 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ndufb11O09111 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndufb11O09111 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndufb11O09111 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ndufb11O09111 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndufb11O09111 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndufb11O09111 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ndufb11O09111 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.21■□□□□ 0.35
Ndufb11O09111 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndufb11O09111 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ndufb11O09111 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndufb11O09111 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndufb11O09111 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Ndufb11O09111 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ndufb11O09111 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufb11O09111 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufb11O09111 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufb11O09111 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufb11O09111 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufb11O09111 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufb11O09111 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ndufb11O09111 Gm30023-201ENSMUST00000197970 889 ntBASIC17.2■□□□□ 0.34
Ndufb11O09111 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufb11O09111 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.2■□□□□ 0.34
Ndufb11O09111 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufb11O09111 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufb11O09111 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ndufb11O09111 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.19■□□□□ 0.34
Ndufb11O09111 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.19■□□□□ 0.34
Ndufb11O09111 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.19■□□□□ 0.34
Ndufb11O09111 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndufb11O09111 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndufb11O09111 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ndufb11O09111 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndufb11O09111 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ndufb11O09111 Gm26115-201ENSMUST00000175605 87 ntBASIC17.18■□□□□ 0.34
Ndufb11O09111 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndufb11O09111 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.18■□□□□ 0.34
Ndufb11O09111 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndufb11O09111 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndufb11O09111 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ndufb11O09111 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndufb11O09111 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ndufb11O09111 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ndufb11O09111 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ndufb11O09111 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ndufb11O09111 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ndufb11O09111 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndufb11O09111 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndufb11O09111 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndufb11O09111 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ndufb11O09111 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufb11O09111 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufb11O09111 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufb11O09111 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufb11O09111 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufb11O09111 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufb11O09111 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ndufb11O09111 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.15■□□□□ 0.34
Ndufb11O09111 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufb11O09111 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufb11O09111 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufb11O09111 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ndufb11O09111 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ndufb11O09111 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ndufb11O09111 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ndufb11O09111 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufb11O09111 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms