Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.36■□□□□ 0.85
Sh3yl1O08641 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3yl1O08641 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3yl1O08641 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3yl1O08641 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3yl1O08641 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3yl1O08641 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3yl1O08641 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3yl1O08641 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.35■□□□□ 0.85
Sh3yl1O08641 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.35■□□□□ 0.85
Sh3yl1O08641 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3yl1O08641 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3yl1O08641 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3yl1O08641 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.34■□□□□ 0.85
Sh3yl1O08641 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3yl1O08641 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3yl1O08641 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3yl1O08641 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3yl1O08641 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Sh3yl1O08641 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3yl1O08641 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3yl1O08641 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3yl1O08641 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3yl1O08641 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3yl1O08641 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3yl1O08641 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.32■□□□□ 0.84
Sh3yl1O08641 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3yl1O08641 Gm5921-201ENSMUST00000075898 882 ntBASIC20.32■□□□□ 0.84
Sh3yl1O08641 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3yl1O08641 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3yl1O08641 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3yl1O08641 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3yl1O08641 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3yl1O08641 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3yl1O08641 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3yl1O08641 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Sh3yl1O08641 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3yl1O08641 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3yl1O08641 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3yl1O08641 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Sh3yl1O08641 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3yl1O08641 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3yl1O08641 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3yl1O08641 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Sh3yl1O08641 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3yl1O08641 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3yl1O08641 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3yl1O08641 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.28■□□□□ 0.84
Sh3yl1O08641 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3yl1O08641 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3yl1O08641 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sh3yl1O08641 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.28■□□□□ 0.84
Sh3yl1O08641 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3yl1O08641 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3yl1O08641 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3yl1O08641 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.27■□□□□ 0.84
Sh3yl1O08641 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3yl1O08641 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3yl1O08641 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sh3yl1O08641 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.26■□□□□ 0.83
Sh3yl1O08641 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3yl1O08641 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Sh3yl1O08641 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Sh3yl1O08641 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3yl1O08641 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3yl1O08641 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.25■□□□□ 0.83
Sh3yl1O08641 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3yl1O08641 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3yl1O08641 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3yl1O08641 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.25■□□□□ 0.83
Sh3yl1O08641 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3yl1O08641 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3yl1O08641 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.24■□□□□ 0.83
Sh3yl1O08641 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3yl1O08641 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.24■□□□□ 0.83
Sh3yl1O08641 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3yl1O08641 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Sh3yl1O08641 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.24■□□□□ 0.83
Sh3yl1O08641 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3yl1O08641 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3yl1O08641 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Sh3yl1O08641 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3yl1O08641 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Sh3yl1O08641 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.23■□□□□ 0.83
Sh3yl1O08641 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Sh3yl1O08641 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3yl1O08641 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3yl1O08641 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Sh3yl1O08641 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.23■□□□□ 0.83
Sh3yl1O08641 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3yl1O08641 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sh3yl1O08641 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3yl1O08641 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3yl1O08641 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3yl1O08641 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.21■□□□□ 0.83
Sh3yl1O08641 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sh3yl1O08641 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3yl1O08641 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.21■□□□□ 0.83
Sh3yl1O08641 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.21■□□□□ 0.83
Sh3yl1O08641 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms