Protein–RNA interactions for Protein: K7N6U2

Gm3542, Predicted gene 3542, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3542K7N6U2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Gm3542K7N6U2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Gm3542K7N6U2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm3542K7N6U2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Gm3542K7N6U2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.32■■□□□ 1
Gm3542K7N6U2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3542K7N6U2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3542K7N6U2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3542K7N6U2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Gm3542K7N6U2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.31■■□□□ 1
Gm3542K7N6U2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3542K7N6U2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.31■■□□□ 1
Gm3542K7N6U2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Gm3542K7N6U2 Gm12821-201ENSMUST00000120022 600 ntBASIC21.31■■□□□ 1
Gm3542K7N6U2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.31■■□□□ 1
Gm3542K7N6U2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm3542K7N6U2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3542K7N6U2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3542K7N6U2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm3542K7N6U2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Gm3542K7N6U2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm3542K7N6U2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm3542K7N6U2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm3542K7N6U2 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.3■■□□□ 1
Gm3542K7N6U2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm3542K7N6U2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3542K7N6U2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3542K7N6U2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.29■■□□□ 1
Gm3542K7N6U2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.29■■□□□ 1
Gm3542K7N6U2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm3542K7N6U2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.29■■□□□ 1
Gm3542K7N6U2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3542K7N6U2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Gm3542K7N6U2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3542K7N6U2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm3542K7N6U2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
Gm3542K7N6U2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm3542K7N6U2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm3542K7N6U2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm3542K7N6U2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.27■■□□□ 1
Gm3542K7N6U2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Gm3542K7N6U2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.27■□□□□ 0.99
Gm3542K7N6U2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3542K7N6U2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3542K7N6U2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3542K7N6U2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm3542K7N6U2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3542K7N6U2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3542K7N6U2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Gm3542K7N6U2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Gm3542K7N6U2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3542K7N6U2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Gm3542K7N6U2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Gm3542K7N6U2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3542K7N6U2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Gm3542K7N6U2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.25■□□□□ 0.99
Gm3542K7N6U2 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.25■□□□□ 0.99
Gm3542K7N6U2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3542K7N6U2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3542K7N6U2 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.24■□□□□ 0.99
Gm3542K7N6U2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3542K7N6U2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.24■□□□□ 0.99
Gm3542K7N6U2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3542K7N6U2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3542K7N6U2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Gm3542K7N6U2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3542K7N6U2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Gm3542K7N6U2 Serp2-204ENSMUST00000228055 705 ntBASIC21.23■□□□□ 0.99
Gm3542K7N6U2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.23■□□□□ 0.99
Gm3542K7N6U2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3542K7N6U2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3542K7N6U2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.22■□□□□ 0.99
Gm3542K7N6U2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.22■□□□□ 0.99
Gm3542K7N6U2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3542K7N6U2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3542K7N6U2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.22■□□□□ 0.99
Gm3542K7N6U2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3542K7N6U2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3542K7N6U2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3542K7N6U2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.21■□□□□ 0.99
Gm3542K7N6U2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3542K7N6U2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3542K7N6U2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.21■□□□□ 0.99
Gm3542K7N6U2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3542K7N6U2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3542K7N6U2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3542K7N6U2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Gm3542K7N6U2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.2■□□□□ 0.98
Gm3542K7N6U2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3542K7N6U2 Golgb1-201ENSMUST00000023534 498 ntBASIC21.2■□□□□ 0.98
Gm3542K7N6U2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
Gm3542K7N6U2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3542K7N6U2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.2■□□□□ 0.98
Gm3542K7N6U2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Gm3542K7N6U2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3542K7N6U2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3542K7N6U2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3542K7N6U2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
Gm3542K7N6U2 Gm27454-201ENSMUST00000185090 204 ntBASIC21.19■□□□□ 0.98
Gm3542K7N6U2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms