Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Serp2-204ENSMUST00000228055 705 ntBASIC24.51■■□□□ 1.51
B020004C17RikJ3QP07 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
B020004C17RikJ3QP07 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
B020004C17RikJ3QP07 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
B020004C17RikJ3QP07 Gm27454-201ENSMUST00000185090 204 ntBASIC24.5■■□□□ 1.51
B020004C17RikJ3QP07 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
B020004C17RikJ3QP07 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
B020004C17RikJ3QP07 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
B020004C17RikJ3QP07 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
B020004C17RikJ3QP07 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC24.49■■□□□ 1.51
B020004C17RikJ3QP07 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
B020004C17RikJ3QP07 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC24.49■■□□□ 1.51
B020004C17RikJ3QP07 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
B020004C17RikJ3QP07 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
B020004C17RikJ3QP07 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
B020004C17RikJ3QP07 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
B020004C17RikJ3QP07 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
B020004C17RikJ3QP07 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
B020004C17RikJ3QP07 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
B020004C17RikJ3QP07 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC24.47■■□□□ 1.51
B020004C17RikJ3QP07 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
B020004C17RikJ3QP07 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
B020004C17RikJ3QP07 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
B020004C17RikJ3QP07 Gm10620-201ENSMUST00000098379 1332 ntBASIC24.46■■□□□ 1.51
B020004C17RikJ3QP07 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
B020004C17RikJ3QP07 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
B020004C17RikJ3QP07 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
B020004C17RikJ3QP07 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
B020004C17RikJ3QP07 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
B020004C17RikJ3QP07 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
B020004C17RikJ3QP07 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
B020004C17RikJ3QP07 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
B020004C17RikJ3QP07 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
B020004C17RikJ3QP07 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
B020004C17RikJ3QP07 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
B020004C17RikJ3QP07 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
B020004C17RikJ3QP07 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
B020004C17RikJ3QP07 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC24.42■■□□□ 1.5
B020004C17RikJ3QP07 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
B020004C17RikJ3QP07 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
B020004C17RikJ3QP07 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
B020004C17RikJ3QP07 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
B020004C17RikJ3QP07 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
B020004C17RikJ3QP07 Gm45417-201ENSMUST00000209533 758 ntBASIC24.41■■□□□ 1.5
B020004C17RikJ3QP07 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
B020004C17RikJ3QP07 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
B020004C17RikJ3QP07 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
B020004C17RikJ3QP07 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
B020004C17RikJ3QP07 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
B020004C17RikJ3QP07 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
B020004C17RikJ3QP07 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC24.4■■□□□ 1.5
B020004C17RikJ3QP07 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC24.4■■□□□ 1.5
B020004C17RikJ3QP07 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
B020004C17RikJ3QP07 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
B020004C17RikJ3QP07 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
B020004C17RikJ3QP07 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
B020004C17RikJ3QP07 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
B020004C17RikJ3QP07 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
B020004C17RikJ3QP07 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
B020004C17RikJ3QP07 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC24.39■■□□□ 1.49
B020004C17RikJ3QP07 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
B020004C17RikJ3QP07 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
B020004C17RikJ3QP07 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC24.38■■□□□ 1.49
B020004C17RikJ3QP07 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
B020004C17RikJ3QP07 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.37■■□□□ 1.49
B020004C17RikJ3QP07 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
B020004C17RikJ3QP07 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
B020004C17RikJ3QP07 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
B020004C17RikJ3QP07 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
B020004C17RikJ3QP07 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
B020004C17RikJ3QP07 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.36■■□□□ 1.49
B020004C17RikJ3QP07 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
B020004C17RikJ3QP07 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC24.36■■□□□ 1.49
B020004C17RikJ3QP07 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
B020004C17RikJ3QP07 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
B020004C17RikJ3QP07 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
B020004C17RikJ3QP07 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC24.35■■□□□ 1.49
B020004C17RikJ3QP07 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
B020004C17RikJ3QP07 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
B020004C17RikJ3QP07 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
B020004C17RikJ3QP07 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
B020004C17RikJ3QP07 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC24.35■■□□□ 1.49
B020004C17RikJ3QP07 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC24.35■■□□□ 1.49
B020004C17RikJ3QP07 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
B020004C17RikJ3QP07 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
B020004C17RikJ3QP07 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
B020004C17RikJ3QP07 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
B020004C17RikJ3QP07 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
B020004C17RikJ3QP07 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
B020004C17RikJ3QP07 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
B020004C17RikJ3QP07 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC24.33■■□□□ 1.49
B020004C17RikJ3QP07 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
B020004C17RikJ3QP07 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
B020004C17RikJ3QP07 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
B020004C17RikJ3QP07 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
B020004C17RikJ3QP07 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
B020004C17RikJ3QP07 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.32■■□□□ 1.48
B020004C17RikJ3QP07 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.32■■□□□ 1.48
B020004C17RikJ3QP07 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
B020004C17RikJ3QP07 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms