Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc149F6V035 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc149F6V035 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.86■■□□□ 1.09
Ccdc149F6V035 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc149F6V035 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.86■■□□□ 1.09
Ccdc149F6V035 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc149F6V035 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc149F6V035 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc149F6V035 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc149F6V035 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc149F6V035 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc149F6V035 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc149F6V035 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.84■■□□□ 1.09
Ccdc149F6V035 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc149F6V035 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc149F6V035 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc149F6V035 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.83■■□□□ 1.09
Ccdc149F6V035 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc149F6V035 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc149F6V035 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc149F6V035 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.83■■□□□ 1.09
Ccdc149F6V035 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Ccdc149F6V035 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc149F6V035 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc149F6V035 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc149F6V035 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc149F6V035 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc149F6V035 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.82■■□□□ 1.08
Ccdc149F6V035 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Ccdc149F6V035 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc149F6V035 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc149F6V035 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc149F6V035 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc149F6V035 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc149F6V035 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.81■■□□□ 1.08
Ccdc149F6V035 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.81■■□□□ 1.08
Ccdc149F6V035 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc149F6V035 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc149F6V035 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc149F6V035 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ccdc149F6V035 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.8■■□□□ 1.08
Ccdc149F6V035 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Ccdc149F6V035 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc149F6V035 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ccdc149F6V035 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc149F6V035 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc149F6V035 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc149F6V035 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc149F6V035 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.79■■□□□ 1.08
Ccdc149F6V035 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc149F6V035 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc149F6V035 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc149F6V035 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc149F6V035 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc149F6V035 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc149F6V035 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.78■■□□□ 1.08
Ccdc149F6V035 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc149F6V035 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc149F6V035 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc149F6V035 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc149F6V035 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc149F6V035 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc149F6V035 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc149F6V035 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc149F6V035 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc149F6V035 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ccdc149F6V035 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.76■■□□□ 1.07
Ccdc149F6V035 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ccdc149F6V035 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc149F6V035 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc149F6V035 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc149F6V035 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.75■■□□□ 1.07
Ccdc149F6V035 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc149F6V035 Gm22238-201ENSMUST00000175222 88 ntBASIC21.75■■□□□ 1.07
Ccdc149F6V035 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc149F6V035 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc149F6V035 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc149F6V035 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc149F6V035 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc149F6V035 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc149F6V035 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc149F6V035 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc149F6V035 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc149F6V035 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc149F6V035 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.73■■□□□ 1.07
Ccdc149F6V035 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.73■■□□□ 1.07
Ccdc149F6V035 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc149F6V035 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc149F6V035 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc149F6V035 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.73■■□□□ 1.07
Ccdc149F6V035 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc149F6V035 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc149F6V035 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Ccdc149F6V035 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc149F6V035 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.72■■□□□ 1.07
Ccdc149F6V035 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc149F6V035 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc149F6V035 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.72■■□□□ 1.07
Ccdc149F6V035 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc149F6V035 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms