Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp27D3YV89 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp27D3YV89 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp27D3YV89 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp27D3YV89 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp27D3YV89 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp27D3YV89 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp27D3YV89 Gm11175-201ENSMUST00000116172 543 ntBASIC17.96■□□□□ 0.47
Mmp27D3YV89 Gm9806-201ENSMUST00000051080 552 ntBASIC17.96■□□□□ 0.47
Mmp27D3YV89 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp27D3YV89 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp27D3YV89 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp27D3YV89 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Mmp27D3YV89 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.95■□□□□ 0.46
Mmp27D3YV89 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp27D3YV89 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp27D3YV89 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp27D3YV89 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Mmp27D3YV89 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp27D3YV89 Gm11687-201ENSMUST00000118911 886 ntBASIC17.95■□□□□ 0.46
Mmp27D3YV89 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp27D3YV89 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp27D3YV89 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Mmp27D3YV89 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp27D3YV89 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.95■□□□□ 0.46
Mmp27D3YV89 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp27D3YV89 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.95■□□□□ 0.46
Mmp27D3YV89 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp27D3YV89 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp27D3YV89 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp27D3YV89 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp27D3YV89 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Mmp27D3YV89 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp27D3YV89 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Mmp27D3YV89 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp27D3YV89 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp27D3YV89 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp27D3YV89 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp27D3YV89 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.94■□□□□ 0.46
Mmp27D3YV89 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp27D3YV89 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp27D3YV89 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp27D3YV89 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp27D3YV89 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp27D3YV89 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.93■□□□□ 0.46
Mmp27D3YV89 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.93■□□□□ 0.46
Mmp27D3YV89 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.93■□□□□ 0.46
Mmp27D3YV89 Gm16437-201ENSMUST00000025669 507 ntBASIC17.93■□□□□ 0.46
Mmp27D3YV89 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp27D3YV89 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Mmp27D3YV89 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp27D3YV89 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp27D3YV89 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp27D3YV89 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp27D3YV89 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp27D3YV89 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp27D3YV89 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp27D3YV89 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp27D3YV89 Gm9812-201ENSMUST00000061934 968 ntBASIC17.92■□□□□ 0.46
Mmp27D3YV89 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp27D3YV89 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp27D3YV89 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp27D3YV89 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp27D3YV89 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Mmp27D3YV89 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp27D3YV89 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp27D3YV89 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp27D3YV89 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp27D3YV89 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Mmp27D3YV89 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp27D3YV89 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp27D3YV89 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp27D3YV89 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp27D3YV89 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp27D3YV89 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Mmp27D3YV89 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp27D3YV89 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp27D3YV89 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp27D3YV89 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp27D3YV89 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp27D3YV89 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp27D3YV89 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp27D3YV89 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Mmp27D3YV89 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp27D3YV89 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp27D3YV89 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp27D3YV89 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.88■□□□□ 0.45
Mmp27D3YV89 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.88■□□□□ 0.45
Mmp27D3YV89 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Mmp27D3YV89 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp27D3YV89 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Mmp27D3YV89 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp27D3YV89 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp27D3YV89 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp27D3YV89 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Mmp27D3YV89 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.87■□□□□ 0.45
Mmp27D3YV89 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp27D3YV89 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.86■□□□□ 0.45
Mmp27D3YV89 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp27D3YV89 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms