Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubr4A2AN08 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubr4A2AN08 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubr4A2AN08 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubr4A2AN08 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubr4A2AN08 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC11.82□□□□□ -0.52
Ubr4A2AN08 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubr4A2AN08 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubr4A2AN08 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubr4A2AN08 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr4A2AN08 Gm42642-201ENSMUST00000200683 355 ntBASIC11.81□□□□□ -0.52
Ubr4A2AN08 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC11.81□□□□□ -0.52
Ubr4A2AN08 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr4A2AN08 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr4A2AN08 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr4A2AN08 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC11.81□□□□□ -0.52
Ubr4A2AN08 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC11.81□□□□□ -0.52
Ubr4A2AN08 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr4A2AN08 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr4A2AN08 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.81□□□□□ -0.52
Ubr4A2AN08 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubr4A2AN08 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.8□□□□□ -0.52
Ubr4A2AN08 Wdr70-203ENSMUST00000227371 1130 ntBASIC11.8□□□□□ -0.52
Ubr4A2AN08 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr4A2AN08 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.8□□□□□ -0.52
Ubr4A2AN08 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ubr4A2AN08 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr4A2AN08 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr4A2AN08 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ubr4A2AN08 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr4A2AN08 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr4A2AN08 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.79□□□□□ -0.52
Ubr4A2AN08 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubr4A2AN08 Mir7075-201ENSMUST00000184187 82 ntBASIC11.79□□□□□ -0.52
Ubr4A2AN08 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ubr4A2AN08 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr4A2AN08 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC11.79□□□□□ -0.52
Ubr4A2AN08 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr4A2AN08 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ubr4A2AN08 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ubr4A2AN08 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ubr4A2AN08 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr4A2AN08 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.78□□□□□ -0.52
Ubr4A2AN08 Gm10493-201ENSMUST00000097270 612 ntBASIC11.78□□□□□ -0.52
Ubr4A2AN08 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr4A2AN08 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr4A2AN08 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr4A2AN08 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr4A2AN08 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr4A2AN08 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr4A2AN08 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr4A2AN08 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Ubr4A2AN08 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr4A2AN08 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.78□□□□□ -0.52
Ubr4A2AN08 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Ubr4A2AN08 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr4A2AN08 Gm44949-201ENSMUST00000206423 1450 ntBASIC11.78□□□□□ -0.52
Ubr4A2AN08 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Ubr4A2AN08 Gm10602-201ENSMUST00000098239 609 ntBASIC11.77□□□□□ -0.52
Ubr4A2AN08 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubr4A2AN08 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubr4A2AN08 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubr4A2AN08 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubr4A2AN08 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.77□□□□□ -0.53
Ubr4A2AN08 Gm10129-202ENSMUST00000193100 1316 ntBASIC11.77□□□□□ -0.53
Ubr4A2AN08 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubr4A2AN08 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubr4A2AN08 Gm22240-201ENSMUST00000175225 82 ntBASIC11.77□□□□□ -0.53
Ubr4A2AN08 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubr4A2AN08 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ubr4A2AN08 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Ubr4A2AN08 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubr4A2AN08 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Ubr4A2AN08 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubr4A2AN08 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Ubr4A2AN08 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ubr4A2AN08 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ubr4A2AN08 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ubr4A2AN08 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubr4A2AN08 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubr4A2AN08 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubr4A2AN08 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubr4A2AN08 Gm10653-202ENSMUST00000139570 835 ntBASIC11.75□□□□□ -0.53
Ubr4A2AN08 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ubr4A2AN08 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ubr4A2AN08 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC11.75□□□□□ -0.53
Ubr4A2AN08 Cdc34b-202ENSMUST00000188741 1252 ntBASIC11.75□□□□□ -0.53
Ubr4A2AN08 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ubr4A2AN08 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ubr4A2AN08 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ubr4A2AN08 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ubr4A2AN08 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ubr4A2AN08 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC11.74□□□□□ -0.53
Ubr4A2AN08 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.74□□□□□ -0.53
Ubr4A2AN08 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ubr4A2AN08 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ubr4A2AN08 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubr4A2AN08 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ubr4A2AN08 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubr4A2AN08 AC099934.2-201ENSMUST00000196389 70 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms