Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav13n-4A0A0G2JG01 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Trav13n-4A0A0G2JG01 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13n-4A0A0G2JG01 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13n-4A0A0G2JG01 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13n-4A0A0G2JG01 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13n-4A0A0G2JG01 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13n-4A0A0G2JG01 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13n-4A0A0G2JG01 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13n-4A0A0G2JG01 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13n-4A0A0G2JG01 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13n-4A0A0G2JG01 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13n-4A0A0G2JG01 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13n-4A0A0G2JG01 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13n-4A0A0G2JG01 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13n-4A0A0G2JG01 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.25■□□□□ 0.35
Trav13n-4A0A0G2JG01 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trav13n-4A0A0G2JG01 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav13n-4A0A0G2JG01 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav13n-4A0A0G2JG01 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.25■□□□□ 0.35
Trav13n-4A0A0G2JG01 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13n-4A0A0G2JG01 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13n-4A0A0G2JG01 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13n-4A0A0G2JG01 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13n-4A0A0G2JG01 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav13n-4A0A0G2JG01 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav13n-4A0A0G2JG01 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13n-4A0A0G2JG01 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13n-4A0A0G2JG01 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13n-4A0A0G2JG01 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13n-4A0A0G2JG01 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav13n-4A0A0G2JG01 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13n-4A0A0G2JG01 Gm15039-201ENSMUST00000118914 875 ntBASIC17.23■□□□□ 0.35
Trav13n-4A0A0G2JG01 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13n-4A0A0G2JG01 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13n-4A0A0G2JG01 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13n-4A0A0G2JG01 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13n-4A0A0G2JG01 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13n-4A0A0G2JG01 Gm15820-201ENSMUST00000201566 728 ntBASIC17.22■□□□□ 0.35
Trav13n-4A0A0G2JG01 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13n-4A0A0G2JG01 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13n-4A0A0G2JG01 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13n-4A0A0G2JG01 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13n-4A0A0G2JG01 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13n-4A0A0G2JG01 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.21■□□□□ 0.35
Trav13n-4A0A0G2JG01 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Trav13n-4A0A0G2JG01 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13n-4A0A0G2JG01 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trav13n-4A0A0G2JG01 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav13n-4A0A0G2JG01 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav13n-4A0A0G2JG01 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav13n-4A0A0G2JG01 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Trav13n-4A0A0G2JG01 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav13n-4A0A0G2JG01 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13n-4A0A0G2JG01 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13n-4A0A0G2JG01 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Trav13n-4A0A0G2JG01 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13n-4A0A0G2JG01 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13n-4A0A0G2JG01 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13n-4A0A0G2JG01 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav13n-4A0A0G2JG01 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13n-4A0A0G2JG01 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Trav13n-4A0A0G2JG01 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13n-4A0A0G2JG01 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13n-4A0A0G2JG01 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13n-4A0A0G2JG01 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.19■□□□□ 0.34
Trav13n-4A0A0G2JG01 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trav13n-4A0A0G2JG01 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trav13n-4A0A0G2JG01 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13n-4A0A0G2JG01 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13n-4A0A0G2JG01 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13n-4A0A0G2JG01 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.18■□□□□ 0.34
Trav13n-4A0A0G2JG01 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav13n-4A0A0G2JG01 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13n-4A0A0G2JG01 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav13n-4A0A0G2JG01 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trav13n-4A0A0G2JG01 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13n-4A0A0G2JG01 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13n-4A0A0G2JG01 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13n-4A0A0G2JG01 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13n-4A0A0G2JG01 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13n-4A0A0G2JG01 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13n-4A0A0G2JG01 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav13n-4A0A0G2JG01 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13n-4A0A0G2JG01 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav13n-4A0A0G2JG01 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trav13n-4A0A0G2JG01 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav13n-4A0A0G2JG01 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.16■□□□□ 0.34
Trav13n-4A0A0G2JG01 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13n-4A0A0G2JG01 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13n-4A0A0G2JG01 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.16■□□□□ 0.34
Trav13n-4A0A0G2JG01 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.16■□□□□ 0.34
Trav13n-4A0A0G2JG01 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.16■□□□□ 0.34
Trav13n-4A0A0G2JG01 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13n-4A0A0G2JG01 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13n-4A0A0G2JG01 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13n-4A0A0G2JG01 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trav13n-4A0A0G2JG01 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.15■□□□□ 0.34
Trav13n-4A0A0G2JG01 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13n-4A0A0G2JG01 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms