Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.44■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Gm43566-201ENSMUST00000196851 808 ntBASIC15.44■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-1A0A0G2JEU8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.43■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav13n-1A0A0G2JEU8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.42■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.42■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Gm15820-201ENSMUST00000201566 728 ntBASIC15.42■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.42■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Trav13n-1A0A0G2JEU8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Gm13238-201ENSMUST00000117655 780 ntBASIC15.41■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-1A0A0G2JEU8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-1A0A0G2JEU8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-1A0A0G2JEU8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-1A0A0G2JEU8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-1A0A0G2JEU8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.38■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav13n-1A0A0G2JEU8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.37■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-1A0A0G2JEU8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav13n-1A0A0G2JEU8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-1A0A0G2JEU8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.35■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.35■□□□□ 0.05
Trav13n-1A0A0G2JEU8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms