Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv26A0A0B4J1P5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.8■□□□□ 0.44
Trbv26A0A0B4J1P5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.8■□□□□ 0.44
Trbv26A0A0B4J1P5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trbv26A0A0B4J1P5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trbv26A0A0B4J1P5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv26A0A0B4J1P5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv26A0A0B4J1P5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv26A0A0B4J1P5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv26A0A0B4J1P5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv26A0A0B4J1P5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv26A0A0B4J1P5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv26A0A0B4J1P5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv26A0A0B4J1P5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv26A0A0B4J1P5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv26A0A0B4J1P5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trbv26A0A0B4J1P5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trbv26A0A0B4J1P5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv26A0A0B4J1P5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv26A0A0B4J1P5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv26A0A0B4J1P5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv26A0A0B4J1P5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv26A0A0B4J1P5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv26A0A0B4J1P5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv26A0A0B4J1P5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv26A0A0B4J1P5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv26A0A0B4J1P5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trbv26A0A0B4J1P5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv26A0A0B4J1P5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv26A0A0B4J1P5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv26A0A0B4J1P5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv26A0A0B4J1P5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv26A0A0B4J1P5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv26A0A0B4J1P5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv26A0A0B4J1P5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trbv26A0A0B4J1P5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv26A0A0B4J1P5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv26A0A0B4J1P5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv26A0A0B4J1P5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv26A0A0B4J1P5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv26A0A0B4J1P5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.76■□□□□ 0.43
Trbv26A0A0B4J1P5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv26A0A0B4J1P5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv26A0A0B4J1P5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trbv26A0A0B4J1P5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv26A0A0B4J1P5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv26A0A0B4J1P5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trbv26A0A0B4J1P5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv26A0A0B4J1P5 Gm45444-201ENSMUST00000211394 898 ntBASIC17.75■□□□□ 0.43
Trbv26A0A0B4J1P5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv26A0A0B4J1P5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv26A0A0B4J1P5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv26A0A0B4J1P5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv26A0A0B4J1P5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trbv26A0A0B4J1P5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv26A0A0B4J1P5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trbv26A0A0B4J1P5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.74■□□□□ 0.43
Trbv26A0A0B4J1P5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.74■□□□□ 0.43
Trbv26A0A0B4J1P5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.74■□□□□ 0.43
Trbv26A0A0B4J1P5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trbv26A0A0B4J1P5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv26A0A0B4J1P5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv26A0A0B4J1P5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv26A0A0B4J1P5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv26A0A0B4J1P5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv26A0A0B4J1P5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trbv26A0A0B4J1P5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv26A0A0B4J1P5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv26A0A0B4J1P5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv26A0A0B4J1P5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv26A0A0B4J1P5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trbv26A0A0B4J1P5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.72■□□□□ 0.43
Trbv26A0A0B4J1P5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trbv26A0A0B4J1P5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv26A0A0B4J1P5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv26A0A0B4J1P5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv26A0A0B4J1P5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trbv26A0A0B4J1P5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trbv26A0A0B4J1P5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv26A0A0B4J1P5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Trbv26A0A0B4J1P5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbv26A0A0B4J1P5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv26A0A0B4J1P5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.7■□□□□ 0.42
Trbv26A0A0B4J1P5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Trbv26A0A0B4J1P5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv26A0A0B4J1P5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv26A0A0B4J1P5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trbv26A0A0B4J1P5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Trbv26A0A0B4J1P5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv26A0A0B4J1P5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.7■□□□□ 0.42
Trbv26A0A0B4J1P5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trbv26A0A0B4J1P5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv26A0A0B4J1P5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv26A0A0B4J1P5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv26A0A0B4J1P5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv26A0A0B4J1P5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv26A0A0B4J1P5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Trbv26A0A0B4J1P5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv26A0A0B4J1P5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv26A0A0B4J1P5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms