Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sirpb1aA0A0A6YYP6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.28■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.27■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.27■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.27■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sirpb1aA0A0A6YYP6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.25■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.25■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sirpb1aA0A0A6YYP6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.24■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sirpb1aA0A0A6YYP6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.22■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.21■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1aA0A0A6YYP6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.2■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Gm7432-201ENSMUST00000210343 879 ntBASIC20.2■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.2■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1aA0A0A6YYP6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1aA0A0A6YYP6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.19■□□□□ 0.82
Sirpb1aA0A0A6YYP6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1aA0A0A6YYP6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.19■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1aA0A0A6YYP6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.19■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sirpb1aA0A0A6YYP6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.18■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sirpb1aA0A0A6YYP6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms