Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-47A0A0A6YY41 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-47A0A0A6YY41 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-47A0A0A6YY41 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-47A0A0A6YY41 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-47A0A0A6YY41 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-47A0A0A6YY41 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-47A0A0A6YY41 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ighv1-47A0A0A6YY41 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-47A0A0A6YY41 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-47A0A0A6YY41 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-47A0A0A6YY41 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-47A0A0A6YY41 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-47A0A0A6YY41 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-47A0A0A6YY41 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-47A0A0A6YY41 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-47A0A0A6YY41 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-47A0A0A6YY41 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-47A0A0A6YY41 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.65■□□□□ 0.42
Ighv1-47A0A0A6YY41 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-47A0A0A6YY41 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-47A0A0A6YY41 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ighv1-47A0A0A6YY41 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-47A0A0A6YY41 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.65■□□□□ 0.42
Ighv1-47A0A0A6YY41 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-47A0A0A6YY41 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-47A0A0A6YY41 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Ighv1-47A0A0A6YY41 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ighv1-47A0A0A6YY41 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-47A0A0A6YY41 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-47A0A0A6YY41 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-47A0A0A6YY41 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-47A0A0A6YY41 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-47A0A0A6YY41 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ighv1-47A0A0A6YY41 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-47A0A0A6YY41 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-47A0A0A6YY41 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-47A0A0A6YY41 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-47A0A0A6YY41 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.63■□□□□ 0.41
Ighv1-47A0A0A6YY41 Mir6538-201ENSMUST00000183713 110 ntBASIC17.63■□□□□ 0.41
Ighv1-47A0A0A6YY41 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.63■□□□□ 0.41
Ighv1-47A0A0A6YY41 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Ighv1-47A0A0A6YY41 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-47A0A0A6YY41 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.62■□□□□ 0.41
Ighv1-47A0A0A6YY41 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-47A0A0A6YY41 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-47A0A0A6YY41 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-47A0A0A6YY41 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-47A0A0A6YY41 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.62■□□□□ 0.41
Ighv1-47A0A0A6YY41 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Ighv1-47A0A0A6YY41 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-47A0A0A6YY41 Notumos-201ENSMUST00000151998 2659 ntBASIC17.61■□□□□ 0.41
Ighv1-47A0A0A6YY41 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-47A0A0A6YY41 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-47A0A0A6YY41 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-47A0A0A6YY41 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-47A0A0A6YY41 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-47A0A0A6YY41 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-47A0A0A6YY41 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-47A0A0A6YY41 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-47A0A0A6YY41 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-47A0A0A6YY41 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-47A0A0A6YY41 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ighv1-47A0A0A6YY41 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-47A0A0A6YY41 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-47A0A0A6YY41 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ighv1-47A0A0A6YY41 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-47A0A0A6YY41 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-47A0A0A6YY41 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-47A0A0A6YY41 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.59■□□□□ 0.41
Ighv1-47A0A0A6YY41 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-47A0A0A6YY41 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ighv1-47A0A0A6YY41 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.58■□□□□ 0.41
Ighv1-47A0A0A6YY41 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.58■□□□□ 0.41
Ighv1-47A0A0A6YY41 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.58■□□□□ 0.4
Ighv1-47A0A0A6YY41 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-47A0A0A6YY41 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-47A0A0A6YY41 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-47A0A0A6YY41 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-47A0A0A6YY41 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Ighv1-47A0A0A6YY41 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-47A0A0A6YY41 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.56■□□□□ 0.4
Ighv1-47A0A0A6YY41 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ighv1-47A0A0A6YY41 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ighv1-47A0A0A6YY41 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms