Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12d-3A0A075B6A4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12d-3A0A075B6A4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12d-3A0A075B6A4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav12d-3A0A075B6A4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12d-3A0A075B6A4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav12d-3A0A075B6A4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12d-3A0A075B6A4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12d-3A0A075B6A4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12d-3A0A075B6A4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Trav12d-3A0A075B6A4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Trav12d-3A0A075B6A4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12d-3A0A075B6A4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12d-3A0A075B6A4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12d-3A0A075B6A4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12d-3A0A075B6A4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12d-3A0A075B6A4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav12d-3A0A075B6A4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12d-3A0A075B6A4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12d-3A0A075B6A4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Trav12d-3A0A075B6A4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12d-3A0A075B6A4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav12d-3A0A075B6A4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.04■□□□□ 0.16
Trav12d-3A0A075B6A4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trav12d-3A0A075B6A4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav12d-3A0A075B6A4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav12d-3A0A075B6A4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav12d-3A0A075B6A4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav12d-3A0A075B6A4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav12d-3A0A075B6A4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.03■□□□□ 0.16
Trav12d-3A0A075B6A4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-3A0A075B6A4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-3A0A075B6A4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-3A0A075B6A4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.03■□□□□ 0.16
Trav12d-3A0A075B6A4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-3A0A075B6A4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-3A0A075B6A4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav12d-3A0A075B6A4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-3A0A075B6A4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-3A0A075B6A4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-3A0A075B6A4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-3A0A075B6A4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-3A0A075B6A4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-3A0A075B6A4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-3A0A075B6A4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav12d-3A0A075B6A4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav12d-3A0A075B6A4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav12d-3A0A075B6A4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav12d-3A0A075B6A4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav12d-3A0A075B6A4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-3A0A075B6A4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-3A0A075B6A4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-3A0A075B6A4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Trav12d-3A0A075B6A4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav12d-3A0A075B6A4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav12d-3A0A075B6A4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-3A0A075B6A4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-3A0A075B6A4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-3A0A075B6A4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12d-3A0A075B6A4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16■□□□□ 0.15
Trav12d-3A0A075B6A4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12d-3A0A075B6A4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12d-3A0A075B6A4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12d-3A0A075B6A4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12d-3A0A075B6A4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12d-3A0A075B6A4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12d-3A0A075B6A4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12d-3A0A075B6A4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav12d-3A0A075B6A4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav12d-3A0A075B6A4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12d-3A0A075B6A4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-3A0A075B6A4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-3A0A075B6A4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-3A0A075B6A4 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.98■□□□□ 0.15
Trav12d-3A0A075B6A4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-3A0A075B6A4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav12d-3A0A075B6A4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-3A0A075B6A4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-3A0A075B6A4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-3A0A075B6A4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-3A0A075B6A4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-3A0A075B6A4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-3A0A075B6A4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12d-3A0A075B6A4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12d-3A0A075B6A4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12d-3A0A075B6A4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12d-3A0A075B6A4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Trav12d-3A0A075B6A4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12d-3A0A075B6A4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12d-3A0A075B6A4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12d-3A0A075B6A4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12d-3A0A075B6A4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC15.96■□□□□ 0.15
Trav12d-3A0A075B6A4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav12d-3A0A075B6A4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12d-3A0A075B6A4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.95■□□□□ 0.14
Trav12d-3A0A075B6A4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav12d-3A0A075B6A4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12d-3A0A075B6A4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12d-3A0A075B6A4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav12d-3A0A075B6A4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms