Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-3A0A075B695 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav9d-3A0A075B695 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav9d-3A0A075B695 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-3A0A075B695 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.23■□□□□ 0.03
Trav9d-3A0A075B695 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-3A0A075B695 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav9d-3A0A075B695 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-3A0A075B695 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-3A0A075B695 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trav9d-3A0A075B695 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-3A0A075B695 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-3A0A075B695 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-3A0A075B695 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav9d-3A0A075B695 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9d-3A0A075B695 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav9d-3A0A075B695 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9d-3A0A075B695 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9d-3A0A075B695 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trav9d-3A0A075B695 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav9d-3A0A075B695 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav9d-3A0A075B695 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-3A0A075B695 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-3A0A075B695 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-3A0A075B695 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-3A0A075B695 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-3A0A075B695 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav9d-3A0A075B695 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-3A0A075B695 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav9d-3A0A075B695 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-3A0A075B695 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav9d-3A0A075B695 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-3A0A075B695 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.19■□□□□ 0.02
Trav9d-3A0A075B695 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-3A0A075B695 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav9d-3A0A075B695 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-3A0A075B695 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-3A0A075B695 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav9d-3A0A075B695 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-3A0A075B695 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-3A0A075B695 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-3A0A075B695 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-3A0A075B695 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-3A0A075B695 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-3A0A075B695 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-3A0A075B695 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav9d-3A0A075B695 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9d-3A0A075B695 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9d-3A0A075B695 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9d-3A0A075B695 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9d-3A0A075B695 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9d-3A0A075B695 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9d-3A0A075B695 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9d-3A0A075B695 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9d-3A0A075B695 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav9d-3A0A075B695 Gm14523-201ENSMUST00000117260 558 ntBASIC15.17■□□□□ 0.02
Trav9d-3A0A075B695 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav9d-3A0A075B695 Mir6538-201ENSMUST00000183713 110 ntBASIC15.17■□□□□ 0.02
Trav9d-3A0A075B695 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav9d-3A0A075B695 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9d-3A0A075B695 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9d-3A0A075B695 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav9d-3A0A075B695 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9d-3A0A075B695 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9d-3A0A075B695 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9d-3A0A075B695 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9d-3A0A075B695 Gm7332-201ENSMUST00000118351 454 ntBASIC15.16■□□□□ 0.02
Trav9d-3A0A075B695 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav9d-3A0A075B695 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
Trav9d-3A0A075B695 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav9d-3A0A075B695 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9d-3A0A075B695 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav9d-3A0A075B695 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.16■□□□□ 0.02
Trav9d-3A0A075B695 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9d-3A0A075B695 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav9d-3A0A075B695 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav9d-3A0A075B695 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Trav9d-3A0A075B695 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav9d-3A0A075B695 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9d-3A0A075B695 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9d-3A0A075B695 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9d-3A0A075B695 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-3A0A075B695 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9d-3A0A075B695 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Trav9d-3A0A075B695 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav9d-3A0A075B695 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms