Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav16nA0A075B634 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav16nA0A075B634 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16nA0A075B634 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16nA0A075B634 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16nA0A075B634 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16nA0A075B634 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav16nA0A075B634 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16nA0A075B634 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16nA0A075B634 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16nA0A075B634 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16nA0A075B634 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16nA0A075B634 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav16nA0A075B634 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav16nA0A075B634 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav16nA0A075B634 Gm9812-201ENSMUST00000061934 968 ntBASIC16.14■□□□□ 0.17
Trav16nA0A075B634 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav16nA0A075B634 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav16nA0A075B634 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav16nA0A075B634 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav16nA0A075B634 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav16nA0A075B634 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav16nA0A075B634 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav16nA0A075B634 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav16nA0A075B634 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav16nA0A075B634 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav16nA0A075B634 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Trav16nA0A075B634 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.12■□□□□ 0.17
Trav16nA0A075B634 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.12■□□□□ 0.17
Trav16nA0A075B634 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav16nA0A075B634 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav16nA0A075B634 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Trav16nA0A075B634 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav16nA0A075B634 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav16nA0A075B634 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav16nA0A075B634 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav16nA0A075B634 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Trav16nA0A075B634 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Trav16nA0A075B634 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav16nA0A075B634 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav16nA0A075B634 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav16nA0A075B634 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav16nA0A075B634 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav16nA0A075B634 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trav16nA0A075B634 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav16nA0A075B634 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav16nA0A075B634 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav16nA0A075B634 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav16nA0A075B634 Gm6821-201ENSMUST00000107540 542 ntBASIC16.11■□□□□ 0.17
Trav16nA0A075B634 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav16nA0A075B634 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.11■□□□□ 0.17
Trav16nA0A075B634 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.11■□□□□ 0.17
Trav16nA0A075B634 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav16nA0A075B634 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16nA0A075B634 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16nA0A075B634 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16nA0A075B634 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16nA0A075B634 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.1■□□□□ 0.17
Trav16nA0A075B634 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16nA0A075B634 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav16nA0A075B634 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav16nA0A075B634 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16nA0A075B634 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav16nA0A075B634 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trav16nA0A075B634 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.1■□□□□ 0.17
Trav16nA0A075B634 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16nA0A075B634 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16nA0A075B634 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16nA0A075B634 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav16nA0A075B634 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16nA0A075B634 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16nA0A075B634 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16nA0A075B634 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16nA0A075B634 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav16nA0A075B634 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav16nA0A075B634 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav16nA0A075B634 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav16nA0A075B634 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav16nA0A075B634 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
Trav16nA0A075B634 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav16nA0A075B634 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav16nA0A075B634 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav16nA0A075B634 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav16nA0A075B634 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav16nA0A075B634 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav16nA0A075B634 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav16nA0A075B634 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16nA0A075B634 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16nA0A075B634 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav16nA0A075B634 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16nA0A075B634 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16nA0A075B634 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16nA0A075B634 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16nA0A075B634 Terc-201ENSMUST00000082862 423 ntBASIC16.07■□□□□ 0.16
Trav16nA0A075B634 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16nA0A075B634 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16nA0A075B634 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav16nA0A075B634 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16nA0A075B634 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16nA0A075B634 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms