Protein–RNA interactions for Protein: A0A075B5T0

Ighv3-8, Immunoglobulin heavy variable V3-8 (Fragment), mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-8A0A075B5T0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-8A0A075B5T0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-8A0A075B5T0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-8A0A075B5T0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.12■□□□□ 0.17
Ighv3-8A0A075B5T0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.12■□□□□ 0.17
Ighv3-8A0A075B5T0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ighv3-8A0A075B5T0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-8A0A075B5T0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-8A0A075B5T0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-8A0A075B5T0 Gm14523-201ENSMUST00000117260 558 ntBASIC16.12■□□□□ 0.17
Ighv3-8A0A075B5T0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-8A0A075B5T0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ighv3-8A0A075B5T0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-8A0A075B5T0 Gm22567-201ENSMUST00000175542 342 ntBASIC16.11■□□□□ 0.17
Ighv3-8A0A075B5T0 Mir6538-201ENSMUST00000183713 110 ntBASIC16.11■□□□□ 0.17
Ighv3-8A0A075B5T0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.11■□□□□ 0.17
Ighv3-8A0A075B5T0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.11■□□□□ 0.17
Ighv3-8A0A075B5T0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ighv3-8A0A075B5T0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-8A0A075B5T0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-8A0A075B5T0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-8A0A075B5T0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.11■□□□□ 0.17
Ighv3-8A0A075B5T0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-8A0A075B5T0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-8A0A075B5T0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Ighv3-8A0A075B5T0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-8A0A075B5T0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-8A0A075B5T0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-8A0A075B5T0 Gm7332-201ENSMUST00000118351 454 ntBASIC16.1■□□□□ 0.17
Ighv3-8A0A075B5T0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Ighv3-8A0A075B5T0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-8A0A075B5T0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-8A0A075B5T0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-8A0A075B5T0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-8A0A075B5T0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-8A0A075B5T0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-8A0A075B5T0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-8A0A075B5T0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-8A0A075B5T0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ighv3-8A0A075B5T0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-8A0A075B5T0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-8A0A075B5T0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-8A0A075B5T0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-8A0A075B5T0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-8A0A075B5T0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.09■□□□□ 0.17
Ighv3-8A0A075B5T0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-8A0A075B5T0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv3-8A0A075B5T0 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.08■□□□□ 0.17
Ighv3-8A0A075B5T0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
Ighv3-8A0A075B5T0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ighv3-8A0A075B5T0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ighv3-8A0A075B5T0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ighv3-8A0A075B5T0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv3-8A0A075B5T0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv3-8A0A075B5T0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.08■□□□□ 0.16
Ighv3-8A0A075B5T0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv3-8A0A075B5T0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv3-8A0A075B5T0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv3-8A0A075B5T0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ighv3-8A0A075B5T0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ighv3-8A0A075B5T0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-8A0A075B5T0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ighv3-8A0A075B5T0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-8A0A075B5T0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.07■□□□□ 0.16
Ighv3-8A0A075B5T0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-8A0A075B5T0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-8A0A075B5T0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-8A0A075B5T0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-8A0A075B5T0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-8A0A075B5T0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv3-8A0A075B5T0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv3-8A0A075B5T0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.06■□□□□ 0.16
Ighv3-8A0A075B5T0 Gm12366-201ENSMUST00000121722 873 ntBASIC16.06■□□□□ 0.16
Ighv3-8A0A075B5T0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.06■□□□□ 0.16
Ighv3-8A0A075B5T0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv3-8A0A075B5T0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.06■□□□□ 0.16
Ighv3-8A0A075B5T0 Gm5786-201ENSMUST00000085368 882 ntBASIC16.06■□□□□ 0.16
Ighv3-8A0A075B5T0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.06■□□□□ 0.16
Ighv3-8A0A075B5T0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv3-8A0A075B5T0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv3-8A0A075B5T0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv3-8A0A075B5T0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Ighv3-8A0A075B5T0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.05■□□□□ 0.16
Ighv3-8A0A075B5T0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv3-8A0A075B5T0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv3-8A0A075B5T0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv3-8A0A075B5T0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.05■□□□□ 0.16
Ighv3-8A0A075B5T0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.05■□□□□ 0.16
Ighv3-8A0A075B5T0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-8A0A075B5T0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-8A0A075B5T0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-8A0A075B5T0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-8A0A075B5T0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-8A0A075B5T0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.04■□□□□ 0.16
Ighv3-8A0A075B5T0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-8A0A075B5T0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-8A0A075B5T0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-8A0A075B5T0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.04■□□□□ 0.16
Ighv3-8A0A075B5T0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-8A0A075B5T0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms