Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
PdfS4R2K0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.33□□□□□ -0.76
PdfS4R2K0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
PdfS4R2K0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
PdfS4R2K0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Gm4995-201ENSMUST00000117247 432 ntBASIC10.33□□□□□ -0.76
PdfS4R2K0 Gm12892-201ENSMUST00000117367 1146 ntBASIC10.33□□□□□ -0.76
PdfS4R2K0 Gm6226-201ENSMUST00000117765 1146 ntBASIC10.33□□□□□ -0.76
PdfS4R2K0 Gm11543-201ENSMUST00000120758 370 ntBASIC10.33□□□□□ -0.76
PdfS4R2K0 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.33□□□□□ -0.76
PdfS4R2K0 Rpph1-201ENSMUST00000175096 319 ntBASIC10.33□□□□□ -0.76
PdfS4R2K0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Gm37230-201ENSMUST00000194491 818 ntBASIC10.33□□□□□ -0.76
PdfS4R2K0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
PdfS4R2K0 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.33□□□□□ -0.76
PdfS4R2K0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC10.33□□□□□ -0.76
PdfS4R2K0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.33□□□□□ -0.76
PdfS4R2K0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
PdfS4R2K0 Nudt18-203ENSMUST00000228768 1578 ntBASIC10.33□□□□□ -0.76
PdfS4R2K0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.33□□□□□ -0.76
PdfS4R2K0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
PdfS4R2K0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PdfS4R2K0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.32□□□□□ -0.76
PdfS4R2K0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Gm16198-201ENSMUST00000118766 670 ntBASIC10.32□□□□□ -0.76
PdfS4R2K0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Gm16026-204ENSMUST00000162652 683 ntBASIC10.32□□□□□ -0.76
PdfS4R2K0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.32□□□□□ -0.76
PdfS4R2K0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Gm18057-201ENSMUST00000208220 503 ntBASIC10.32□□□□□ -0.76
PdfS4R2K0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.32□□□□□ -0.76
PdfS4R2K0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
PdfS4R2K0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PdfS4R2K0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms