Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Gm12403-201ENSMUST00000121384 959 ntBASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Gm26464-201ENSMUST00000157094 305 ntBASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2afb2S4R1M3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb2S4R1M3 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.46□□□□□ -0.26
H2afb2S4R1M3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.46□□□□□ -0.26
H2afb2S4R1M3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb2S4R1M3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb2S4R1M3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb2S4R1M3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb2S4R1M3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Gm5354-201ENSMUST00000182417 973 ntBASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb2S4R1M3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Gm15678-201ENSMUST00000117573 960 ntBASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Gm15376-201ENSMUST00000122258 783 ntBASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb2S4R1M3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms