Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcb1Q9Z0H3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Gm13392-201ENSMUST00000117708 150 ntBASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcb1Q9Z0H3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Gm13369-201ENSMUST00000119442 987 ntBASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Gm11637-201ENSMUST00000120601 592 ntBASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Gm10268-201ENSMUST00000085340 555 ntBASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcb1Q9Z0H3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms