Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Gm29649-201ENSMUST00000185649 419 ntBASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Gm42550-201ENSMUST00000201553 960 ntBASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Grk6-205ENSMUST00000224653 2976 ntBASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx9Q9WUH2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lhx9Q9WUH2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.77□□□□□ -0.36
Lhx9Q9WUH2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lhx9Q9WUH2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lhx9Q9WUH2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lhx9Q9WUH2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Lhx9Q9WUH2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Lhx9Q9WUH2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lhx9Q9WUH2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lhx9Q9WUH2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lhx9Q9WUH2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Gm13612-201ENSMUST00000119276 390 ntBASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx9Q9WUH2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.76□□□□□ -0.37
Lhx9Q9WUH2 Gm14660-201ENSMUST00000119809 575 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms