Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClcnkaQ9WUB7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Gm27772-201ENSMUST00000184900 187 ntBASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Gm28760-201ENSMUST00000185995 736 ntBASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Gm44855-201ENSMUST00000205725 362 ntBASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClcnkaQ9WUB7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms