Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
CcsQ9WU84 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
CcsQ9WU84 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
CcsQ9WU84 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
CcsQ9WU84 Gm18057-201ENSMUST00000208220 503 ntBASIC10.46□□□□□ -0.73
CcsQ9WU84 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
CcsQ9WU84 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.46□□□□□ -0.73
CcsQ9WU84 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
CcsQ9WU84 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CcsQ9WU84 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
CcsQ9WU84 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CcsQ9WU84 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
CcsQ9WU84 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CcsQ9WU84 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
CcsQ9WU84 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
CcsQ9WU84 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CcsQ9WU84 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CcsQ9WU84 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CcsQ9WU84 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CcsQ9WU84 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.46□□□□□ -0.74
CcsQ9WU84 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CcsQ9WU84 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CcsQ9WU84 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
CcsQ9WU84 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CcsQ9WU84 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CcsQ9WU84 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CcsQ9WU84 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
CcsQ9WU84 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
CcsQ9WU84 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CcsQ9WU84 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
CcsQ9WU84 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.45□□□□□ -0.74
CcsQ9WU84 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.45□□□□□ -0.74
CcsQ9WU84 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CcsQ9WU84 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.45□□□□□ -0.74
CcsQ9WU84 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.45□□□□□ -0.74
CcsQ9WU84 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC10.45□□□□□ -0.74
CcsQ9WU84 Gm13365-201ENSMUST00000121188 973 ntBASIC10.45□□□□□ -0.74
CcsQ9WU84 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.45□□□□□ -0.74
CcsQ9WU84 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.45□□□□□ -0.74
CcsQ9WU84 Gm18889-201ENSMUST00000174284 929 ntBASIC10.45□□□□□ -0.74
CcsQ9WU84 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Mir6990-201ENSMUST00000183724 91 ntBASIC10.45□□□□□ -0.74
CcsQ9WU84 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
CcsQ9WU84 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.45□□□□□ -0.74
CcsQ9WU84 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CcsQ9WU84 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
CcsQ9WU84 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.45□□□□□ -0.74
CcsQ9WU84 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.45□□□□□ -0.74
CcsQ9WU84 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.45□□□□□ -0.74
CcsQ9WU84 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CcsQ9WU84 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CcsQ9WU84 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CcsQ9WU84 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CcsQ9WU84 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CcsQ9WU84 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CcsQ9WU84 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
CcsQ9WU84 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CcsQ9WU84 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CcsQ9WU84 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CcsQ9WU84 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
CcsQ9WU84 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CcsQ9WU84 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.44□□□□□ -0.74
CcsQ9WU84 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CcsQ9WU84 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.44□□□□□ -0.74
CcsQ9WU84 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CcsQ9WU84 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CcsQ9WU84 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CcsQ9WU84 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CcsQ9WU84 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
CcsQ9WU84 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CcsQ9WU84 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CcsQ9WU84 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms