Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.13□□□□□ -0.31
Cdh17Q9R100 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.13□□□□□ -0.31
Cdh17Q9R100 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.13□□□□□ -0.31
Cdh17Q9R100 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Gm17795-201ENSMUST00000214505 757 ntBASIC13.13□□□□□ -0.31
Cdh17Q9R100 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.13□□□□□ -0.31
Cdh17Q9R100 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.13□□□□□ -0.31
Cdh17Q9R100 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.13□□□□□ -0.31
Cdh17Q9R100 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.12□□□□□ -0.31
Cdh17Q9R100 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Mir874-201ENSMUST00000104769 76 ntBASIC13.12□□□□□ -0.31
Cdh17Q9R100 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Cdh17Q9R100 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.12□□□□□ -0.31
Cdh17Q9R100 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdh17Q9R100 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.11□□□□□ -0.31
Cdh17Q9R100 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.11□□□□□ -0.31
Cdh17Q9R100 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.11□□□□□ -0.31
Cdh17Q9R100 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.11□□□□□ -0.31
Cdh17Q9R100 Gm12403-201ENSMUST00000121384 959 ntBASIC13.11□□□□□ -0.31
Cdh17Q9R100 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.11□□□□□ -0.31
Cdh17Q9R100 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.11□□□□□ -0.31
Cdh17Q9R100 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.11□□□□□ -0.31
Cdh17Q9R100 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.11□□□□□ -0.31
Cdh17Q9R100 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.11□□□□□ -0.31
Cdh17Q9R100 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Gm45841-201ENSMUST00000207700 164 ntBASIC13.11□□□□□ -0.31
Cdh17Q9R100 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms