Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Gm13385-201ENSMUST00000121089 220 ntBASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Gm9522-201ENSMUST00000182394 926 ntBASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Gm10766-202ENSMUST00000194123 606 ntBASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Gm44719-201ENSMUST00000206404 149 ntBASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Gm5425-201ENSMUST00000214125 459 ntBASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a2Q9JLR1 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms