Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Gm6152-201ENSMUST00000151704 340 ntBASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Gm7287-201ENSMUST00000205267 602 ntBASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Grk6-205ENSMUST00000224653 2976 ntBASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3aQ9JKX8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3aQ9JKX8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms