Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Gm45167-201ENSMUST00000208007 322 ntBASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trem1Q9JKE2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Gm17807-201ENSMUST00000186869 298 ntBASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Syt7-205ENSMUST00000224135 1557 ntBASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.03□□□□□ -0.48
Trem1Q9JKE2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trem1Q9JKE2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trem1Q9JKE2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trem1Q9JKE2 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.02□□□□□ -0.48
Trem1Q9JKE2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trem1Q9JKE2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trem1Q9JKE2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trem1Q9JKE2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trem1Q9JKE2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Mir7071-201ENSMUST00000184847 69 ntBASIC12.02□□□□□ -0.49
Trem1Q9JKE2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Gm7787-201ENSMUST00000216858 688 ntBASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trem1Q9JKE2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms