Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm22189-201ENSMUST00000103822 86 ntBASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Gm27838-201ENSMUST00000184829 128 ntBASIC14.03□□□□□ -0.16
Cpne8Q9DC53 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Gm7730-201ENSMUST00000212486 454 ntBASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Syt7-205ENSMUST00000224135 1557 ntBASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cpne8Q9DC53 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cpne8Q9DC53 Syt7-204ENSMUST00000223586 1344 ntBASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne8Q9DC53 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Gm24694-201ENSMUST00000180054 110 ntBASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Gm27663-201ENSMUST00000184839 110 ntBASIC14.01□□□□□ -0.17
Cpne8Q9DC53 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Gm42612-201ENSMUST00000197986 623 ntBASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Gm43170-201ENSMUST00000199827 612 ntBASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne8Q9DC53 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms